Sun S - Search Results

1

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics.

Li H, Zhou J, Li Z, Chen S, Liao X, Zhang B, Zhang R, Wang Y, Sun S, Gao X. Li H, et al. Among authors: sun s. Nat Commun. 2023 Mar 21;14(1):1548. doi: 10.1038/s41467-023-37168-7. Nat Commun. 2023. PMID: 36941264 Free PMC article.

2

HepParser: An Intelligent Software Program for Deciphering Low-Molecular-Weight Heparin Based on Mass Spectrometry.

Wang H, Wang Y, Hou M, Zhang C, Wang Y, Guo Z, Bu D, Li Y, Huang C, Sun S. Wang H, et al. Among authors: sun s. Front Chem. 2021 Sep 9;9:723149. doi: 10.3389/fchem.2021.723149. eCollection 2021. Front Chem. 2021. PMID: 34568278 Free PMC article.

3

Accurate transcriptome-wide identification and quantification of alternative polyadenylation from RNA-seq data with APAIQ.

Long Y, Zhang B, Tian S, Chan JJ, Zhou J, Li Z, Li Y, An Z, Liao X, Wang Y, Sun S, Xu Y, Tay Y, Chen W, Gao X. Long Y, et al. Among authors: sun s. Genome Res. 2023 Apr;33(4):644-657. doi: 10.1101/gr.277177.122. Epub 2023 Apr 28. Genome Res. 2023. PMID: 37117035 Free PMC article.

4

Predicting the antigenic evolution of SARS-COV-2 with deep learning.

Han W, Chen N, Xu X, Sahil A, Zhou J, Li Z, Zhong H, Gao E, Zhang R, Wang Y, Sun S, Cheung PP, Gao X. Han W, et al. Among authors: sun s. Nat Commun. 2023 Jun 13;14(1):3478. doi: 10.1038/s41467-023-39199-6. Nat Commun. 2023. PMID: 37311849 Free PMC article.

5

EMNGly: predicting N-linked glycosylation sites using the language models for feature extraction.

Hou X, Wang Y, Bu D, Wang Y, Sun S. Hou X, et al. Among authors: sun s. Bioinformatics. 2023 Nov 1;39(11):btad650. doi: 10.1093/bioinformatics/btad650. Bioinformatics. 2023. PMID: 37930896 Free PMC article.

6

Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression.

Deng W, Zhu X, Skogerbø G, Zhao Y, Fu Z, Wang Y, He H, Cai L, Sun H, Liu C, Li B, Bai B, Wang J, Jia D, Sun S, He H, Cui Y, Wang Y, Bu D, Chen R. Deng W, et al. Among authors: sun s, sun h. Genome Res. 2006 Jan;16(1):20-9. doi: 10.1101/gr.4139206. Epub 2005 Dec 12. Genome Res. 2006. PMID: 16344563 Free PMC article.

7

Condensing Raman spectrum for single-cell phenotype analysis.

Sun S, Wang X, Gao X, Ren L, Su X, Bu D, Ning K. Sun S, et al. BMC Bioinformatics. 2015;16 Suppl 18(Suppl 18):S15. doi: 10.1186/1471-2105-16-S18-S15. Epub 2015 Dec 9. BMC Bioinformatics. 2015. PMID: 26681607 Free PMC article.

8

GIPS-Mix for Accurate Identification of Isomeric Components in Glycan Mixtures Using Intelligent Group-Opting Strategy.

Huang C, Hou M, Yan J, Wang H, Wang Y, Cao C, Wang Y, Gao H, Ma X, Zheng Y, Bu D, Chai W, Li Y, Sun S. Huang C, et al. Among authors: sun s. Anal Chem. 2023 Jan 17;95(2):811-819. doi: 10.1021/acs.analchem.2c02978. Epub 2022 Dec 22. Anal Chem. 2023. PMID: 36547394 Free PMC article.

9

Identifying Hfq-binding small RNA targets in Escherichia coli.

Zhang Y, Sun S, Wu T, Wang J, Liu C, Chen L, Zhu X, Zhao Y, Zhang Z, Shi B, Lu H, Chen R. Zhang Y, et al. Among authors: sun s. Biochem Biophys Res Commun. 2006 May 12;343(3):950-5. doi: 10.1016/j.bbrc.2006.02.196. Epub 2006 Mar 20. Biochem Biophys Res Commun. 2006. PMID: 16574072

10

MicroRNA regulation of messenger-like noncoding RNAs: a network of mutual microRNA control.

Zhao Y, He S, Liu C, Ru S, Zhao H, Yang Z, Yang P, Yuan X, Sun S, Bu D, Huang J, Skogerbø G, Chen R. Zhao Y, et al. Among authors: sun s. Trends Genet. 2008 Jul;24(7):323-7. doi: 10.1016/j.tig.2008.04.004. Epub 2008 May 29. Trends Genet. 2008. PMID: 18514357

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