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The Taxon Hypothesis Paradigm-On the Unambiguous Detection and Communication of Taxa.
Microorganisms. 2020 Nov 30;8(12):1910. doi: 10.3390/microorganisms8121910.
Microorganisms. 2020.
PMID: 33266327
Free PMC article.
Towards a unified paradigm for sequence-based identification of fungi.
Kõljalg U, Nilsson RH, Abarenkov K, Tedersoo L, Taylor AF, Bahram M, Bates ST, Bruns TD, Bengtsson-Palme J, Callaghan TM, Douglas B, Drenkhan T, Eberhardt U, Dueñas M, Grebenc T, Griffith GW, Hartmann M, Kirk PM, Kohout P, Larsson E, Lindahl BD, Lücking R, Martín MP, Matheny PB, Nguyen NH, Niskanen T, Oja J, Peay KG, Peintner U, Peterson M, Põldmaa K, Saag L, Saar I, Schüßler A, Scott JA, Senés C, Smith ME, Suija A, Taylor DL, Telleria MT, Weiss M, Larsson KH.
Kõljalg U, et al. Among authors: suija a.
Mol Ecol. 2013 Nov;22(21):5271-7. doi: 10.1111/mec.12481. Epub 2013 Sep 24.
Mol Ecol. 2013.
PMID: 24112409
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Fungal biogeography. Global diversity and geography of soil fungi.
Tedersoo L, Bahram M, Põlme S, Kõljalg U, Yorou NS, Wijesundera R, Villarreal Ruiz L, Vasco-Palacios AM, Thu PQ, Suija A, Smith ME, Sharp C, Saluveer E, Saitta A, Rosas M, Riit T, Ratkowsky D, Pritsch K, Põldmaa K, Piepenbring M, Phosri C, Peterson M, Parts K, Pärtel K, Otsing E, Nouhra E, Njouonkou AL, Nilsson RH, Morgado LN, Mayor J, May TW, Majuakim L, Lodge DJ, Lee SS, Larsson KH, Kohout P, Hosaka K, Hiiesalu I, Henkel TW, Harend H, Guo LD, Greslebin A, Grelet G, Geml J, Gates G, Dunstan W, Dunk C, Drenkhan R, Dearnaley J, De Kesel A, Dang T, Chen X, Buegger F, Brearley FQ, Bonito G, Anslan S, Abell S, Abarenkov K.
Tedersoo L, et al. Among authors: suija a.
Science. 2014 Nov 28;346(6213):1256688. doi: 10.1126/science.1256688.
Science. 2014.
PMID: 25430773
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Considerations and consequences of allowing DNA sequence data as types of fungal taxa.
Zamora JC, Svensson M, Kirschner R, Olariaga I, Ryman S, Parra LA, Geml J, Rosling A, Adamčík S, Ahti T, Aime MC, Ainsworth AM, Albert L, Albertó E, García AA, Ageev D, Agerer R, Aguirre-Hudson B, Ammirati J, Andersson H, Angelini C, Antonín V, Aoki T, Aptroot A, Argaud D, Sosa BIA, Aronsen A, Arup U, Asgari B, Assyov B, Atienza V, Bandini D, Baptista-Ferreira JL, Baral HO, Baroni T, Barreto RW, Beker H, Bell A, Bellanger JM, Bellù F, Bemmann M, Bendiksby M, Bendiksen E, Bendiksen K, Benedek L, Bérešová-Guttová A, Berger F, Berndt R, Bernicchia A, Biketova AY, Bizio E, Bjork C, Boekhout T, Boertmann D, Böhning T, Boittin F, Boluda CG, Boomsluiter MW, Borovička J, Brandrud TE, Braun U, Brodo I, Bulyonkova T, Burdsall HH Jr, Buyck B, Burgaz AR, Calatayud V, Callac P, Campo E, Candusso M, Capoen B, Carbó J, Carbone M, Castañeda-Ruiz RF, Castellano MA, Chen J, Clerc P, Consiglio G, Corriol G, Courtecuisse R, Crespo A, Cripps C, Crous PW, da Silva GA, da Silva M, Dam M, Dam N, Dämmrich F, Das K, Davies L, De Crop E, De Kesel A, De Lange R, De Madrignac Bonzi B, Dela Cruz TEE, Delgat L, Demoulin V, Desjardin DE, Diederich P, Dima B, Dios MM, Divakar PK, Douanla-Meli C, Douglas B, Drechs…
See abstract for full author list ➔
Zamora JC, et al. Among authors: suija a.
IMA Fungus. 2018 Jun;9(1):167-175. doi: 10.5598/imafungus.2018.09.01.10. Epub 2018 May 24.
IMA Fungus. 2018.
PMID: 30018877
Free PMC article.
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The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered.
Abarenkov K, Nilsson RH, Larsson KH, Taylor AFS, May TW, Frøslev TG, Pawlowska J, Lindahl B, Põldmaa K, Truong C, Vu D, Hosoya T, Niskanen T, Piirmann T, Ivanov F, Zirk A, Peterson M, Cheeke TE, Ishigami Y, Jansson AT, Jeppesen TS, Kristiansson E, Mikryukov V, Miller JT, Oono R, Ossandon FJ, Paupério J, Saar I, Schigel D, Suija A, Tedersoo L, Kõljalg U.
Abarenkov K, et al. Among authors: suija a.
Nucleic Acids Res. 2024 Jan 5;52(D1):D791-D797. doi: 10.1093/nar/gkad1039.
Nucleic Acids Res. 2024.
PMID: 37953409
Free PMC article.
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Lichenicolous species of Hainesia belong to Phacidiales (Leotiomycetes) and are included in an extended concept of Epithamnolia.
Suija A, van den Boom P, Zimmermann E, Zhurbenko MP, Diederich P.
Suija A, et al.
Mycologia. 2017;109(6):882-899. doi: 10.1080/00275514.2017.1413891. Epub 2018 Mar 8.
Mycologia. 2017.
PMID: 29517949
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Phylogenetic placement and lectotypification of Pseudotryblidium neesii (Helotiales, Leotiomycetes).
Suija A, Haldeman M, Zimmermann E, Braun U, Diederich P.
Suija A, et al.
Fungal Syst Evol. 2020 Jun;5:139-149. doi: 10.3114/fuse.2020.05.09. Epub 2019 Nov 18.
Fungal Syst Evol. 2020.
PMID: 32467920
Free PMC article.
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A phylogenetic assessment of a fungicolous lineage in Coniocybomycetes: Chaenotricha, a new genus of Trichaptum-inhabiting species.
Suija A, McMullin RT, Lõhmus P.
Suija A, et al.
Fungal Syst Evol. 2023 Nov;12:255-269. doi: 10.3114/fuse.2023.12.13. Epub 2023 Nov 22.
Fungal Syst Evol. 2023.
PMID: 38455956
Free PMC article.
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