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CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories.
Jurcik A, Bednar D, Byska J, Marques SM, Furmanova K, Daniel L, Kokkonen P, Brezovsky J, Strnad O, Stourac J, Pavelka A, Manak M, Damborsky J, Kozlikova B. Jurcik A, et al. Among authors: strnad o. Bioinformatics. 2018 Oct 15;34(20):3586-3588. doi: 10.1093/bioinformatics/bty386. Bioinformatics. 2018. PMID: 29741570 Free PMC article.
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures.
Chovancova E, Pavelka A, Benes P, Strnad O, Brezovsky J, Kozlikova B, Gora A, Sustr V, Klvana M, Medek P, Biedermannova L, Sochor J, Damborsky J. Chovancova E, et al. Among authors: strnad o. PLoS Comput Biol. 2012;8(10):e1002708. doi: 10.1371/journal.pcbi.1002708. Epub 2012 Oct 18. PLoS Comput Biol. 2012. PMID: 23093919 Free PMC article.
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures.
Kozlikova B, Sebestova E, Sustr V, Brezovsky J, Strnad O, Daniel L, Bednar D, Pavelka A, Manak M, Bezdeka M, Benes P, Kotry M, Gora A, Damborsky J, Sochor J. Kozlikova B, et al. Among authors: strnad o. Bioinformatics. 2014 Sep 15;30(18):2684-5. doi: 10.1093/bioinformatics/btu364. Epub 2014 May 29. Bioinformatics. 2014. PMID: 24876375
SpyDirect: A Novel Biofunctionalization Method for High Stability and Longevity of Electronic Biosensors.
Guo K, Grünberg R, Ren Y, Chang T, Wustoni S, Strnad O, Koklu A, Díaz-Galicia E, Agudelo JP, Druet V, Castillo TCH, Moser M, Ohayon D, Hama A, Dada A, McCulloch I, Viola I, Arold ST, Inal S. Guo K, et al. Among authors: strnad o. Adv Sci (Weinh). 2023 Dec 31:e2306716. doi: 10.1002/advs.202306716. Online ahead of print. Adv Sci (Weinh). 2023. PMID: 38161228
Toxicological investigation of lilial.
Jablonská E, Míchal Z, Křížkovská B, Strnad O, Tran VN, Žalmanová T, Petr J, Lipov J, Viktorová J. Jablonská E, et al. Among authors: strnad o. Sci Rep. 2023 Oct 28;13(1):18536. doi: 10.1038/s41598-023-45598-y. Sci Rep. 2023. PMID: 37898679 Free PMC article.
Cannabidiol nanoemulsion for eye treatment - Anti-inflammatory, wound healing activity and its bioavailability using in vitro human corneal substitute.
Tran VN, Strnad O, Šuman J, Veverková T, Sukupová A, Cejnar P, Hynek R, Kronusová O, Šach J, Kaštánek P, Ruml T, Viktorová J. Tran VN, et al. Among authors: strnad o. Int J Pharm. 2023 Aug 25;643:123202. doi: 10.1016/j.ijpharm.2023.123202. Epub 2023 Jul 3. Int J Pharm. 2023. PMID: 37406946 Free article.
Nanotilus: Generator of Immersive Guided-Tours in Crowded 3D Environments.
Alharbi R, Strnad O, Luidolt LR, Waldner M, Kouril D, Bohak C, Klein T, Groller E, Viola I. Alharbi R, et al. Among authors: strnad o. IEEE Trans Vis Comput Graph. 2023 Mar;29(3):1860-1875. doi: 10.1109/TVCG.2021.3133592. Epub 2023 Jan 30. IEEE Trans Vis Comput Graph. 2023. PMID: 34882555
12 results