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A coarse-grained model for DNA origami.
Reshetnikov RV, Stolyarova AV, Zalevsky AO, Panteleev DY, Pavlova GV, Klinov DV, Golovin AV, Protopopova AD. Reshetnikov RV, et al. Among authors: stolyarova av. Nucleic Acids Res. 2018 Feb 16;46(3):1102-1112. doi: 10.1093/nar/gkx1262. Nucleic Acids Res. 2018. PMID: 29267876 Free PMC article.
Senescence and entrenchment in evolution of amino acid sites.
Stolyarova AV, Nabieva E, Ptushenko VV, Favorov AV, Popova AV, Neverov AD, Bazykin GA. Stolyarova AV, et al. Nat Commun. 2020 Sep 14;11(1):4603. doi: 10.1038/s41467-020-18366-z. Nat Commun. 2020. PMID: 32929079 Free PMC article.
Bursts of amino acid replacements in protein evolution.
Stolyarova AV, Bazykin GA, Neretina TV, Kondrashov AS. Stolyarova AV, et al. R Soc Open Sci. 2019 Mar 27;6(3):181095. doi: 10.1098/rsos.181095. eCollection 2019 Mar. R Soc Open Sci. 2019. PMID: 31031994 Free PMC article.
Allele-specific nonstationarity in evolution of influenza A virus surface proteins.
Popova AV, Safina KR, Ptushenko VV, Stolyarova AV, Favorov AV, Neverov AD, Bazykin GA. Popova AV, et al. Among authors: stolyarova av. Proc Natl Acad Sci U S A. 2019 Oct 15;116(42):21104-21112. doi: 10.1073/pnas.1904246116. Epub 2019 Oct 2. Proc Natl Acad Sci U S A. 2019. PMID: 31578251 Free PMC article.