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Historical and Current Perspectives on the Systematics of the 'Enigmatic' Diatom Genus Rhoicosphenia (Bacillariophyta), with Single and Multi-Molecular Marker and Morphological Analyses and Discussion on the Monophyly of 'Monoraphid' Diatoms.
PLoS One. 2016 Apr 5;11(4):e0152797. doi: 10.1371/journal.pone.0152797. eCollection 2016.
PLoS One. 2016.
PMID: 27045763
Free PMC article.
Molecular phylogeny of Amphora sensu lato (Bacillariophyta): an investigation into the monophyly and classification of the amphoroid diatoms.
Stepanek JG, Kociolek JP.
Stepanek JG, et al.
Protist. 2014 Mar;165(2):177-95. doi: 10.1016/j.protis.2014.02.002. Epub 2014 Feb 17.
Protist. 2014.
PMID: 24646793
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Comparative analysis of the mitochondrial genomes of six newly sequenced diatoms reveals group II introns in the barcoding region of cox1.
Pogoda CS, Keepers KG, Hamsher SE, Stepanek JG, Kane NC, Kociolek JP.
Pogoda CS, et al. Among authors: stepanek jg.
Mitochondrial DNA A DNA Mapp Seq Anal. 2019 Jan;30(1):43-51. doi: 10.1080/24701394.2018.1450397. Epub 2018 Mar 11.
Mitochondrial DNA A DNA Mapp Seq Anal. 2019.
PMID: 29527965
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Extensive chloroplast genome rearrangement amongst three closely related Halamphora spp. (Bacillariophyceae), and evidence for rapid evolution as compared to land plants.
Hamsher SE, Keepers KG, Pogoda CS, Stepanek JG, Kane NC, Kociolek JP.
Hamsher SE, et al. Among authors: stepanek jg.
PLoS One. 2019 Jul 3;14(7):e0217824. doi: 10.1371/journal.pone.0217824. eCollection 2019.
PLoS One. 2019.
PMID: 31269054
Free PMC article.
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Molecular phylogeny of the diatom genera Amphora and Halamphora (Bacillariophyta) with a focus on morphological and ecological evolution.
Stepanek JG, Patrick Kociolek J.
Stepanek JG, et al.
J Phycol. 2019 Apr;55(2):442-456. doi: 10.1111/jpy.12836. Epub 2019 Feb 22.
J Phycol. 2019.
PMID: 30659609
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Hairpins involving both inverted and direct repeats are associated with homoplasious indels in non-coding chloroplast DNA of Taraxacum (Lactuceae: Asteraceae).
Mes TH, Kuperus P, Kirschner J, Stepanek J, Oosterveld P, Storchova H, den Nijs JC.
Mes TH, et al.
Genome. 2000 Aug;43(4):634-41. doi: 10.1139/g99-135.
Genome. 2000.
PMID: 10984175
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Detection of genetically divergent clone mates in apomictic dandelions.
Mes TH, Kuperus P, Kirschner J, Stepánek J, Storchová H, Oosterveld P, den Nijs JC.
Mes TH, et al.
Mol Ecol. 2002 Feb;11(2):253-65. doi: 10.1046/j.1365-294x.2002.01427.x.
Mol Ecol. 2002.
PMID: 11856426
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