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Bayesian phylodynamics reveals the transmission dynamics of avian influenza A(H7N9) virus at the human-live bird market interface in China.
Guinat C, Tang H, Yang Q, Valenzuela Agüí C, Vaughan TG, Scire J, Yu H, Wang W, Chen Z, Ducatez MF, Stadler T. Guinat C, et al. Among authors: stadler t. Proc Natl Acad Sci U S A. 2023 Apr 25;120(17):e2215610120. doi: 10.1073/pnas.2215610120. Epub 2023 Apr 17. Proc Natl Acad Sci U S A. 2023. PMID: 37068240 Free PMC article.
Taming the BEAST-A Community Teaching Material Resource for BEAST 2.
Barido-Sottani J, Bošková V, Plessis LD, Kühnert D, Magnus C, Mitov V, Müller NF, PecErska J, Rasmussen DA, Zhang C, Drummond AJ, Heath TA, Pybus OG, Vaughan TG, Stadler T. Barido-Sottani J, et al. Among authors: stadler t. Syst Biol. 2018 Jan 1;67(1):170-174. doi: 10.1093/sysbio/syx060. Syst Biol. 2018. PMID: 28673048 Free PMC article.
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis.
Bouckaert R, Vaughan TG, Barido-Sottani J, Duchêne S, Fourment M, Gavryushkina A, Heled J, Jones G, Kühnert D, De Maio N, Matschiner M, Mendes FK, Müller NF, Ogilvie HA, du Plessis L, Popinga A, Rambaut A, Rasmussen D, Siveroni I, Suchard MA, Wu CH, Xie D, Zhang C, Stadler T, Drummond AJ. Bouckaert R, et al. Among authors: stadler t. PLoS Comput Biol. 2019 Apr 8;15(4):e1006650. doi: 10.1371/journal.pcbi.1006650. eCollection 2019 Apr. PLoS Comput Biol. 2019. PMID: 30958812 Free PMC article.
Estimating Epidemic Incidence and Prevalence from Genomic Data.
Vaughan TG, Leventhal GE, Rasmussen DA, Drummond AJ, Welch D, Stadler T. Vaughan TG, et al. Among authors: stadler t. Mol Biol Evol. 2019 Aug 1;36(8):1804-1816. doi: 10.1093/molbev/msz106. Mol Biol Evol. 2019. PMID: 31058982 Free PMC article.
271 results