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Accurate mapping of tRNA reads.
Hoffmann A, Fallmann J, Vilardo E, Mörl M, Stadler PF, Amman F. Hoffmann A, et al. Among authors: stadler pf. Bioinformatics. 2018 Apr 1;34(7):1116-1124. doi: 10.1093/bioinformatics/btx756. Bioinformatics. 2018. PMID: 29228294
Alignment of RNA base pairing probability matrices.
Hofacker IL, Bernhart SH, Stadler PF. Hofacker IL, et al. Among authors: stadler pf. Bioinformatics. 2004 Sep 22;20(14):2222-7. doi: 10.1093/bioinformatics/bth229. Epub 2004 Apr 8. Bioinformatics. 2004. PMID: 15073017
Non-coding RNAs in Ciona intestinalis.
Missal K, Rose D, Stadler PF. Missal K, et al. Among authors: stadler pf. Bioinformatics. 2005 Sep 1;21 Suppl 2:ii77-8. doi: 10.1093/bioinformatics/bti1113. Bioinformatics. 2005. PMID: 16204130
Local RNA base pairing probabilities in large sequences.
Bernhart SH, Hofacker IL, Stadler PF. Bernhart SH, et al. Among authors: stadler pf. Bioinformatics. 2006 Mar 1;22(5):614-5. doi: 10.1093/bioinformatics/btk014. Epub 2005 Dec 20. Bioinformatics. 2006. PMID: 16368769
Thermodynamics of RNA-RNA binding.
Mückstein U, Tafer H, Hackermüller J, Bernhart SH, Stadler PF, Hofacker IL. Mückstein U, et al. Among authors: stadler pf. Bioinformatics. 2006 May 15;22(10):1177-82. doi: 10.1093/bioinformatics/btl024. Epub 2006 Jan 29. Bioinformatics. 2006. PMID: 16446276
CREx: inferring genomic rearrangements based on common intervals.
Bernt M, Merkle D, Ramsch K, Fritzsch G, Perseke M, Bernhard D, Schlegel M, Stadler PF, Middendorf M. Bernt M, et al. Among authors: stadler pf. Bioinformatics. 2007 Nov 1;23(21):2957-8. doi: 10.1093/bioinformatics/btm468. Epub 2007 Sep 25. Bioinformatics. 2007. PMID: 17895271
594 results