Sorzano COS - Search Results

1

Protein dynamics developments for the large scale and cryoEM: case study of ProDy 2.0.

Krieger JM, Sorzano COS, Carazo JM, Bahar I. Krieger JM, et al. Among authors: sorzano cos. Acta Crystallogr D Struct Biol. 2022 Apr 1;78(Pt 4):399-409. doi: 10.1107/S2059798322001966. Epub 2022 Mar 16. Acta Crystallogr D Struct Biol. 2022. PMID: 35362464 Free PMC article. Review.

2

Large T antigen on the simian virus 40 origin of replication: a 3D snapshot prior to DNA replication.

Gomez-Lorenzo MG, Valle M, Frank J, Gruss C, Sorzano CO, Chen XS, Donate LE, Carazo JM. Gomez-Lorenzo MG, et al. EMBO J. 2003 Dec 1;22(23):6205-13. doi: 10.1093/emboj/cdg612. EMBO J. 2003. PMID: 14633980 Free PMC article.

3

Error analysis in the determination of the electron microscopical contrast transfer function parameters from experimental power Spectra.

Sorzano CO, Otero A, Olmos EM, Carazo JM. Sorzano CO, et al. BMC Struct Biol. 2009 Mar 26;9:18. doi: 10.1186/1472-6807-9-18. BMC Struct Biol. 2009. PMID: 19321015 Free PMC article.

4

On the development of three new tools for organizing and sharing information in three-dimensional electron microscopy.

Marabini R, Macias JR, Vargas J, Quintana A, Sorzano CO, Carazo JM. Marabini R, et al. Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):695-700. doi: 10.1107/S0907444913007038. Epub 2013 Apr 19. Acta Crystallogr D Biol Crystallogr. 2013. PMID: 23633578

5

Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol.

Sorzano CO, de la Rosa-Trevín JM, Tama F, Jonić S. Sorzano CO, et al. J Struct Biol. 2014 Nov;188(2):134-41. doi: 10.1016/j.jsb.2014.09.005. Epub 2014 Sep 27. J Struct Biol. 2014. PMID: 25268657

6

Measurement of the modulation transfer function of an X-ray microscope based on multiple Fourier orders analysis of a Siemens star.

Otón J, Sorzano CO, Marabini R, Pereiro E, Carazo JM. Otón J, et al. Opt Express. 2015 Apr 20;23(8):9567-72. doi: 10.1364/OE.23.009567. Opt Express. 2015. PMID: 25968993 Free article.

7

3DIANA: 3D Domain Interaction Analysis: A Toolbox for Quaternary Structure Modeling.

Segura J, Sanchez-Garcia R, Tabas-Madrid D, Cuenca-Alba J, Sorzano CO, Carazo JM. Segura J, et al. Biophys J. 2016 Feb 23;110(4):766-75. doi: 10.1016/j.bpj.2015.11.3519. Epub 2016 Jan 7. Biophys J. 2016. PMID: 26772592 Free PMC article.

8

Characterization of transfer function, resolution and depth of field of a soft X-ray microscope applied to tomography enhancement by Wiener deconvolution.

Otón J, Pereiro E, Pérez-Berná AJ, Millach L, Sorzano CO, Marabini R, Carazo JM. Otón J, et al. Biomed Opt Express. 2016 Nov 14;7(12):5092-5103. doi: 10.1364/BOE.7.005092. eCollection 2016 Dec 1. Biomed Opt Express. 2016. PMID: 28018727 Free PMC article.

9

XTEND: Extending the depth of field in cryo soft X-ray tomography.

Otón J, Pereiro E, Conesa JJ, Chichón FJ, Luque D, Rodríguez JM, Pérez-Berná AJ, Sorzano CO, Klukowska J, Herman GT, Vargas J, Marabini R, Carrascosa JL, Carazo JM. Otón J, et al. Sci Rep. 2017 Apr 4;7:45808. doi: 10.1038/srep45808. Sci Rep. 2017. PMID: 28374769 Free PMC article.

10

Scipion web tools: Easy to use cryo-EM image processing over the web.

Conesa Mingo P, Gutierrez J, Quintana A, de la Rosa Trevín JM, Zaldívar-Peraza A, Cuenca Alba J, Kazemi M, Vargas J, Del Cano L, Segura J, Sorzano COS, Carazo JM. Conesa Mingo P, et al. Among authors: sorzano cos. Protein Sci. 2018 Jan;27(1):269-275. doi: 10.1002/pro.3315. Epub 2017 Nov 6. Protein Sci. 2018. PMID: 28971542 Free PMC article.

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