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CyVerse: Cyberinfrastructure for open science.
Swetnam TL, Antin PB, Bartelme R, Bucksch A, Camhy D, Chism G, Choi I, Cooksey AM, Cosi M, Cowen C, Culshaw-Maurer M, Davey R, Davey S, Devisetty U, Edgin T, Edmonds A, Fedorov D, Frady J, Fonner J, Gillan JK, Hossain I, Joyce B, Lang K, Lee T, Littin S, McEwen I, Merchant N, Micklos D, Nelson A, Ramsey A, Roberts S, Sarando P, Skidmore E, Song J, Sprinkle MM, Srinivasan S, Stanzione D, Strootman JD, Stryeck S, Tuteja R, Vaughn M, Wali M, Wall M, Walls R, Wang L, Wickizer T, Williams J, Wregglesworth J, Lyons E. Swetnam TL, et al. Among authors: song j. PLoS Comput Biol. 2024 Feb 7;20(2):e1011270. doi: 10.1371/journal.pcbi.1011270. eCollection 2024 Feb. PLoS Comput Biol. 2024. PMID: 38324613 Free PMC article.
Genomic distribution of H3K9me2 and DNA methylation in a maize genome.
West PT, Li Q, Ji L, Eichten SR, Song J, Vaughn MW, Schmitz RJ, Springer NM. West PT, et al. Among authors: song j. PLoS One. 2014 Aug 14;9(8):e105267. doi: 10.1371/journal.pone.0105267. eCollection 2014. PLoS One. 2014. PMID: 25122127 Free PMC article.
Repliscan: a tool for classifying replication timing regions.
Zynda GJ, Song J, Concia L, Wear EE, Hanley-Bowdoin L, Thompson WF, Vaughn MW. Zynda GJ, et al. Among authors: song j. BMC Bioinformatics. 2017 Aug 7;18(1):362. doi: 10.1186/s12859-017-1774-x. BMC Bioinformatics. 2017. PMID: 28784090 Free PMC article.
Genome-Wide Analysis of the Arabidopsis Replication Timing Program.
Concia L, Brooks AM, Wheeler E, Zynda GJ, Wear EE, LeBlanc C, Song J, Lee TJ, Pascuzzi PE, Martienssen RA, Vaughn MW, Thompson WF, Hanley-Bowdoin L. Concia L, et al. Among authors: song j. Plant Physiol. 2018 Mar;176(3):2166-2185. doi: 10.1104/pp.17.01537. Epub 2018 Jan 4. Plant Physiol. 2018. PMID: 29301956 Free PMC article.
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