Smith ZD - Search Results

1

Hijacking of transcriptional condensates by endogenous retroviruses.

Asimi V, Sampath Kumar A, Niskanen H, Riemenschneider C, Hetzel S, Naderi J, Fasching N, Popitsch N, Du M, Kretzmer H, Smith ZD, Weigert R, Walther M, Mamde S, Meierhofer D, Wittler L, Buschow R, Timmermann B, Cisse II, Ameres SL, Meissner A, Hnisz D. Asimi V, et al. Among authors: smith zd. Nat Genet. 2022 Aug;54(8):1238-1247. doi: 10.1038/s41588-022-01132-w. Epub 2022 Jul 21. Nat Genet. 2022. PMID: 35864192 Free PMC article.

2

High-throughput bisulfite sequencing in mammalian genomes.

Smith ZD, Gu H, Bock C, Gnirke A, Meissner A. Smith ZD, et al. Methods. 2009 Jul;48(3):226-32. doi: 10.1016/j.ymeth.2009.05.003. Epub 2009 May 12. Methods. 2009. PMID: 19442738 Free PMC article.

3

Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution.

Gu H, Bock C, Mikkelsen TS, Jäger N, Smith ZD, Tomazou E, Gnirke A, Lander ES, Meissner A. Gu H, et al. Among authors: smith zd. Nat Methods. 2010 Feb;7(2):133-6. doi: 10.1038/nmeth.1414. Epub 2010 Jan 10. Nat Methods. 2010. PMID: 20062050 Free PMC article.

4

Dynamic single-cell imaging of direct reprogramming reveals an early specifying event.

Smith ZD, Nachman I, Regev A, Meissner A. Smith ZD, et al. Nat Biotechnol. 2010 May;28(5):521-6. doi: 10.1038/nbt.1632. Epub 2010 May 2. Nat Biotechnol. 2010. PMID: 20436460 Free PMC article.

5

Reprogramming factor expression initiates widespread targeted chromatin remodeling.

Koche RP, Smith ZD, Adli M, Gu H, Ku M, Gnirke A, Bernstein BE, Meissner A. Koche RP, et al. Among authors: smith zd. Cell Stem Cell. 2011 Jan 7;8(1):96-105. doi: 10.1016/j.stem.2010.12.001. Cell Stem Cell. 2011. PMID: 21211784 Free PMC article.

6

Reference Maps of human ES and iPS cell variation enable high-throughput characterization of pluripotent cell lines.

Bock C, Kiskinis E, Verstappen G, Gu H, Boulting G, Smith ZD, Ziller M, Croft GF, Amoroso MW, Oakley DH, Gnirke A, Eggan K, Meissner A. Bock C, et al. Among authors: smith zd. Cell. 2011 Feb 4;144(3):439-52. doi: 10.1016/j.cell.2010.12.032. Cell. 2011. PMID: 21295703 Free PMC article.

7

Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling.

Gu H, Smith ZD, Bock C, Boyle P, Gnirke A, Meissner A. Gu H, et al. Among authors: smith zd. Nat Protoc. 2011 Apr;6(4):468-81. doi: 10.1038/nprot.2010.190. Epub 2011 Mar 18. Nat Protoc. 2011. PMID: 21412275

8

Epigenomics and chromatin dynamics.

Akopian V, Chan MM, Clement K, Galonska C, Gifford CA, Lehtola E, Liao J, Samavarchi-Tehrani P, Sindhu C, Smith ZD, Tsankov AM, Webster J, Zhang Y, Ziller MJ, Meissner A. Akopian V, et al. Among authors: smith zd. Genome Biol. 2012 Feb 24;13(2):313. doi: 10.1186/gb-2012-13-2-313. Genome Biol. 2012. PMID: 22364154 Free PMC article.

9

A unique regulatory phase of DNA methylation in the early mammalian embryo.

Smith ZD, Chan MM, Mikkelsen TS, Gu H, Gnirke A, Regev A, Meissner A. Smith ZD, et al. Nature. 2012 Mar 28;484(7394):339-44. doi: 10.1038/nature10960. Nature. 2012. PMID: 22456710 Free PMC article.

10

DNA methylation dynamics during in vivo differentiation of blood and skin stem cells.

Bock C, Beerman I, Lien WH, Smith ZD, Gu H, Boyle P, Gnirke A, Fuchs E, Rossi DJ, Meissner A. Bock C, et al. Among authors: smith zd. Mol Cell. 2012 Aug 24;47(4):633-47. doi: 10.1016/j.molcel.2012.06.019. Epub 2012 Jul 26. Mol Cell. 2012. PMID: 22841485 Free PMC article.

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