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Genomic insights into the secondary aquatic transition of penguins.
Cole TL, Zhou C, Fang M, Pan H, Ksepka DT, Fiddaman SR, Emerling CA, Thomas DB, Bi X, Fang Q, Ellegaard MR, Feng S, Smith AL, Heath TA, Tennyson AJD, Borboroglu PG, Wood JR, Hadden PW, Grosser S, Bost CA, Cherel Y, Mattern T, Hart T, Sinding MS, Shepherd LD, Phillips RA, Quillfeldt P, Masello JF, Bouzat JL, Ryan PG, Thompson DR, Ellenberg U, Dann P, Miller G, Dee Boersma P, Zhao R, Gilbert MTP, Yang H, Zhang DX, Zhang G. Cole TL, et al. Among authors: smith al. Nat Commun. 2022 Jul 19;13(1):3912. doi: 10.1038/s41467-022-31508-9. Nat Commun. 2022. PMID: 35853876 Free PMC article.
Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird.
Levy H, Fiddaman SR, Vianna JA, Noll D, Clucas GV, Sidhu JKH, Polito MJ, Bost CA, Phillips RA, Crofts S, Miller GD, Pistorius P, Bonnadonna F, Le Bohec C, Barbosa A, Trathan P, Raya Rey A, Frantz LAF, Hart T, Smith AL. Levy H, et al. Among authors: smith al. Mol Biol Evol. 2020 Jun 1;37(6):1708-1726. doi: 10.1093/molbev/msaa040. Mol Biol Evol. 2020. PMID: 32096861 Free PMC article.
Repertoire analysis of γδ T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as well as identifying public and private repertoires.
Dixon R, Preston SG, Dascalu S, Flammer PG, Fiddaman SR, McLoughlin K, Boyd A, Volf J, Rychlik I, Bonsall MB, Kaspers B, Smith AL. Dixon R, et al. Among authors: smith al. BMC Genomics. 2021 Oct 6;22(1):719. doi: 10.1186/s12864-021-08036-9. BMC Genomics. 2021. PMID: 34610803 Free PMC article.
Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors.
Fiddaman SR, Vinkler M, Spiro SG, Levy H, Emerling CA, Boyd AC, Dimopoulos EA, Vianna JA, Cole TL, Pan H, Fang M, Zhang G, Hart T, Frantz LAF, Smith AL. Fiddaman SR, et al. Among authors: smith al. Mol Biol Evol. 2022 Jan 7;39(1):msab354. doi: 10.1093/molbev/msab354. Mol Biol Evol. 2022. PMID: 34897511 Free PMC article.
Correction to: Repertoire analysis of γδ T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as well as identifying public and private repertoires.
Dixon R, Preston SG, Dascalu S, Flammer PG, Fiddaman SR, McLoughlin K, Boyd A, Volf J, Rychlik I, Bonsall MB, Kaspers B, Smith AL. Dixon R, et al. Among authors: smith al. BMC Genomics. 2021 Nov 16;22(1):825. doi: 10.1186/s12864-021-08128-6. BMC Genomics. 2021. PMID: 34784884 Free PMC article. No abstract available.
Understanding the evolution of immune genes in jawed vertebrates.
Vinkler M, Fiddaman SR, Těšický M, O'Connor EA, Savage AE, Lenz TL, Smith AL, Kaufman J, Bolnick DI, Davies CS, Dedić N, Flies AS, Samblás MMG, Henschen AE, Novák K, Palomar G, Raven N, Samaké K, Slade J, Veetil NK, Voukali E, Höglund J, Richardson DS, Westerdahl H. Vinkler M, et al. Among authors: smith al. J Evol Biol. 2023 Jun;36(6):847-873. doi: 10.1111/jeb.14181. Epub 2023 May 31. J Evol Biol. 2023. PMID: 37255207 Free PMC article. Review.
Comparative micro-epidemiology of pathogenic avian influenza virus outbreaks in a wild bird population.
Hill SC, Hansen R, Watson S, Coward V, Russell C, Cooper J, Essen S, Everest H, Parag KV, Fiddaman S, Reid S, Lewis N, Brookes SM, Smith AL, Sheldon B, Perrins CM, Brown IH, Pybus OG. Hill SC, et al. Among authors: smith al. Philos Trans R Soc Lond B Biol Sci. 2019 Jun 24;374(1775):20180259. doi: 10.1098/rstb.2018.0259. Philos Trans R Soc Lond B Biol Sci. 2019. PMID: 31056057 Free PMC article.
1,319 results