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The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.
Mallick S, Li H, Lipson M, Mathieson I, Gymrek M, Racimo F, Zhao M, Chennagiri N, Nordenfelt S, Tandon A, Skoglund P, Lazaridis I, Sankararaman S, Fu Q, Rohland N, Renaud G, Erlich Y, Willems T, Gallo C, Spence JP, Song YS, Poletti G, Balloux F, van Driem G, de Knijff P, Romero IG, Jha AR, Behar DM, Bravi CM, Capelli C, Hervig T, Moreno-Estrada A, Posukh OL, Balanovska E, Balanovsky O, Karachanak-Yankova S, Sahakyan H, Toncheva D, Yepiskoposyan L, Tyler-Smith C, Xue Y, Abdullah MS, Ruiz-Linares A, Beall CM, Di Rienzo A, Jeong C, Starikovskaya EB, Metspalu E, Parik J, Villems R, Henn BM, Hodoglugil U, Mahley R, Sajantila A, Stamatoyannopoulos G, Wee JT, Khusainova R, Khusnutdinova E, Litvinov S, Ayodo G, Comas D, Hammer MF, Kivisild T, Klitz W, Winkler CA, Labuda D, Bamshad M, Jorde LB, Tishkoff SA, Watkins WS, Metspalu M, Dryomov S, Sukernik R, Singh L, Thangaraj K, Pääbo S, Kelso J, Patterson N, Reich D. Mallick S, et al. Among authors: singh l. Nature. 2016 Oct 13;538(7624):201-206. doi: 10.1038/nature18964. Epub 2016 Sep 21. Nature. 2016. PMID: 27654912 Free PMC article.
Reconstructing Indian population history.
Reich D, Thangaraj K, Patterson N, Price AL, Singh L. Reich D, et al. Among authors: singh l. Nature. 2009 Sep 24;461(7263):489-94. doi: 10.1038/nature08365. Nature. 2009. PMID: 19779445 Free PMC article.
Ancient human genomes suggest three ancestral populations for present-day Europeans.
Lazaridis I, Patterson N, Mittnik A, Renaud G, Mallick S, Kirsanow K, Sudmant PH, Schraiber JG, Castellano S, Lipson M, Berger B, Economou C, Bollongino R, Fu Q, Bos KI, Nordenfelt S, Li H, de Filippo C, Prüfer K, Sawyer S, Posth C, Haak W, Hallgren F, Fornander E, Rohland N, Delsate D, Francken M, Guinet JM, Wahl J, Ayodo G, Babiker HA, Bailliet G, Balanovska E, Balanovsky O, Barrantes R, Bedoya G, Ben-Ami H, Bene J, Berrada F, Bravi CM, Brisighelli F, Busby GB, Cali F, Churnosov M, Cole DE, Corach D, Damba L, van Driem G, Dryomov S, Dugoujon JM, Fedorova SA, Gallego Romero I, Gubina M, Hammer M, Henn BM, Hervig T, Hodoglugil U, Jha AR, Karachanak-Yankova S, Khusainova R, Khusnutdinova E, Kittles R, Kivisild T, Klitz W, Kučinskas V, Kushniarevich A, Laredj L, Litvinov S, Loukidis T, Mahley RW, Melegh B, Metspalu E, Molina J, Mountain J, Näkkäläjärvi K, Nesheva D, Nyambo T, Osipova L, Parik J, Platonov F, Posukh O, Romano V, Rothhammer F, Rudan I, Ruizbakiev R, Sahakyan H, Sajantila A, Salas A, Starikovskaya EB, Tarekegn A, Toncheva D, Turdikulova S, Uktveryte I, Utevska O, Vasquez R, Villena M, Voevoda M, Winkler CA, Yepiskoposyan L, Zalloua P, Zemunik T, Cooper A, Capelli C, Tho… See abstract for full author list ➔ Lazaridis I, et al. Among authors: singh l. Nature. 2014 Sep 18;513(7518):409-13. doi: 10.1038/nature13673. Nature. 2014. PMID: 25230663 Free PMC article.
Population genetic structure in Indian Austroasiatic speakers: the role of landscape barriers and sex-specific admixture.
Chaubey G, Metspalu M, Choi Y, Mägi R, Romero IG, Soares P, van Oven M, Behar DM, Rootsi S, Hudjashov G, Mallick CB, Karmin M, Nelis M, Parik J, Reddy AG, Metspalu E, van Driem G, Xue Y, Tyler-Smith C, Thangaraj K, Singh L, Remm M, Richards MB, Lahr MM, Kayser M, Villems R, Kivisild T. Chaubey G, et al. Among authors: singh l. Mol Biol Evol. 2011 Feb;28(2):1013-24. doi: 10.1093/molbev/msq288. Epub 2010 Oct 26. Mol Biol Evol. 2011. PMID: 20978040 Free PMC article.
The promise of discovering population-specific disease-associated genes in South Asia.
Nakatsuka N, Moorjani P, Rai N, Sarkar B, Tandon A, Patterson N, Bhavani GS, Girisha KM, Mustak MS, Srinivasan S, Kaushik A, Vahab SA, Jagadeesh SM, Satyamoorthy K, Singh L, Reich D, Thangaraj K. Nakatsuka N, et al. Among authors: singh l. Nat Genet. 2017 Sep;49(9):1403-1407. doi: 10.1038/ng.3917. Epub 2017 Jul 17. Nat Genet. 2017. PMID: 28714977 Free PMC article.
Phylogeography and origin of Indian domestic goats.
Joshi MB, Rout PK, Mandal AK, Tyler-Smith C, Singh L, Thangaraj K. Joshi MB, et al. Among authors: singh l. Mol Biol Evol. 2004 Mar;21(3):454-62. doi: 10.1093/molbev/msh038. Epub 2003 Dec 5. Mol Biol Evol. 2004. PMID: 14660684
Phylogeography of mtDNA haplogroup R7 in the Indian peninsula.
Chaubey G, Karmin M, Metspalu E, Metspalu M, Selvi-Rani D, Singh VK, Parik J, Solnik A, Naidu BP, Kumar A, Adarsh N, Mallick CB, Trivedi B, Prakash S, Reddy R, Shukla P, Bhagat S, Verma S, Vasnik S, Khan I, Barwa A, Sahoo D, Sharma A, Rashid M, Chandra V, Reddy AG, Torroni A, Foley RA, Thangaraj K, Singh L, Kivisild T, Villems R. Chaubey G, et al. Among authors: singh l, singh vk. BMC Evol Biol. 2008 Aug 4;8:227. doi: 10.1186/1471-2148-8-227. BMC Evol Biol. 2008. PMID: 18680585 Free PMC article.
Traces of sub-Saharan and Middle Eastern lineages in Indian Muslim populations.
Eaaswarkhanth M, Haque I, Ravesh Z, Romero IG, Meganathan PR, Dubey B, Khan FA, Chaubey G, Kivisild T, Tyler-Smith C, Singh L, Thangaraj K. Eaaswarkhanth M, et al. Among authors: singh l. Eur J Hum Genet. 2010 Mar;18(3):354-63. doi: 10.1038/ejhg.2009.168. Epub 2009 Oct 7. Eur J Hum Genet. 2010. PMID: 19809480 Free PMC article.
Indian Siddis: African descendants with Indian admixture.
Shah AM, Tamang R, Moorjani P, Rani DS, Govindaraj P, Kulkarni G, Bhattacharya T, Mustak MS, Bhaskar LV, Reddy AG, Gadhvi D, Gai PB, Chaubey G, Patterson N, Reich D, Tyler-Smith C, Singh L, Thangaraj K. Shah AM, et al. Among authors: singh l. Am J Hum Genet. 2011 Jul 15;89(1):154-61. doi: 10.1016/j.ajhg.2011.05.030. Epub 2011 Jul 7. Am J Hum Genet. 2011. PMID: 21741027 Free PMC article.
1,952 results