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Evolution of immune genes is associated with the Black Death.
Klunk J, Vilgalys TP, Demeure CE, Cheng X, Shiratori M, Madej J, Beau R, Elli D, Patino MI, Redfern R, DeWitte SN, Gamble JA, Boldsen JL, Carmichael A, Varlik N, Eaton K, Grenier JC, Golding GB, Devault A, Rouillard JM, Yotova V, Sindeaux R, Ye CJ, Bikaran M, Dumaine A, Brinkworth JF, Missiakas D, Rouleau GA, Steinrücken M, Pizarro-Cerdá J, Poinar HN, Barreiro LB. Klunk J, et al. Among authors: sindeaux r. Nature. 2022 Nov;611(7935):312-319. doi: 10.1038/s41586-022-05349-x. Epub 2022 Oct 19. Nature. 2022. PMID: 36261521 Free PMC article.
Alveolar macrophages from persons living with HIV show impaired epigenetic response to Mycobacterium tuberculosis.
Correa-Macedo W, Fava VM, Orlova M, Cassart P, Olivenstein R, Sanz J, Xu YZ, Dumaine A, Sindeaux RH, Yotova V, Pacis A, Girouard J, Kalsdorf B, Lange C, Routy JP, Barreiro LB, Schurr E. Correa-Macedo W, et al. Among authors: sindeaux rh. J Clin Invest. 2021 Nov 15;131(22):e148013. doi: 10.1172/JCI148013. J Clin Invest. 2021. PMID: 34473646 Free PMC article.
Transposable elements are associated with the variable response to influenza infection.
Chen X, Pacis A, Aracena KA, Gona S, Kwan T, Groza C, Lin YL, Sindeaux R, Yotova V, Pramatarova A, Simon MM, Pastinen T, Barreiro LB, Bourque G. Chen X, et al. Among authors: sindeaux r. Cell Genom. 2023 Apr 7;3(5):100292. doi: 10.1016/j.xgen.2023.100292. eCollection 2023 May 10. Cell Genom. 2023. PMID: 37228757 Free PMC article.
Epigenetic variation impacts individual differences in the transcriptional response to influenza infection.
Aracena KA, Lin YL, Luo K, Pacis A, Gona S, Mu Z, Yotova V, Sindeaux R, Pramatarova A, Simon MM, Chen X, Groza C, Lougheed D, Gregoire R, Brownlee D, Boye C, Pique-Regi R, Li Y, He X, Bujold D, Pastinen T, Bourque G, Barreiro LB. Aracena KA, et al. Among authors: sindeaux r. Nat Genet. 2024 Mar;56(3):408-419. doi: 10.1038/s41588-024-01668-z. Epub 2024 Feb 29. Nat Genet. 2024. PMID: 38424460
Multi-Omic blood analysis reveals differences in innate inflammatory sensitivity between species.
Gregory DJ, Han F, Li P, Gritsenko M, Kyle J, Riley FE, Chavez D, Yotova V, Sindeaux RHM, Hawash MBF, Xu F, Hung LY, Hayden DL, Tompkins RG, Lanford RE, Kobzik L, Hellman J, Jacobs JM, Barreiro LB, Xiao W, Warren HS. Gregory DJ, et al. Among authors: sindeaux rhm. medRxiv [Preprint]. 2023 Nov 30:2023.11.30.23299243. doi: 10.1101/2023.11.30.23299243. medRxiv. 2023. PMID: 38076828 Free PMC article. Preprint.
Reply to Barton et al: signatures of natural selection during the Black Death.
Vilgalys TP, Klunk J, Demeure CE, Cheng X, Shiratori M, Madej J, Beau R, Elli D, Patino MI, Redfern R, DeWitte SN, Gamble JA, Boldsen JL, Carmichael A, Varlik N, Eaton K, Grenier JC, Golding GB, Devault A, Rouillard JM, Yotova V, Sindeaux R, Ye CJ, Bikaran M, Dumaine A, Brinkworth JF, Missiakas D, Rouleau GA, Steinrücken M, Pizarro-Cerdá J, Poinar HN, Barreiro LB. Vilgalys TP, et al. Among authors: sindeaux r. bioRxiv [Preprint]. 2023 Apr 7:2023.04.06.535944. doi: 10.1101/2023.04.06.535944. bioRxiv. 2023. PMID: 37066254 Free PMC article. Preprint.
Dental panoramic indices and fractal dimension measurements in osteogenesis imperfecta children under pamidronate treatment.
Apolinário AC, Sindeaux R, de Souza Figueiredo PT, Guimarães AT, Acevedo AC, Castro LC, de Paula AP, de Paula LM, de Melo NS, Leite AF. Apolinário AC, et al. Among authors: sindeaux r. Dentomaxillofac Radiol. 2016;45(4):20150400. doi: 10.1259/dmfr.20150400. Epub 2016 Mar 24. Dentomaxillofac Radiol. 2016. PMID: 26954289 Free PMC article.
Genetics of leprosy: Expected-and unexpected-developments and perspectives.
Sauer ME, Salomão H, Ramos GB, D'Espindula HR, Rodrigues RS, Macedo WC, Sindeaux RH, Mira MT. Sauer ME, et al. Among authors: sindeaux rh. Clin Dermatol. 2016 Jan-Feb;34(1):96-104. doi: 10.1016/j.clindermatol.2015.10.005. Epub 2015 Oct 23. Clin Dermatol. 2016. PMID: 26773629
13 results