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OncoboxPD: human 51 672 molecular pathways database with tools for activity calculating and visualization.
Comput Struct Biotechnol J. 2022 May 10;20:2280-2291. doi: 10.1016/j.csbj.2022.05.006. eCollection 2022.
Comput Struct Biotechnol J. 2022.
PMID: 35615022
Free PMC article.
FLOating-Window Projective Separator (FloWPS): A Data Trimming Tool for Support Vector Machines (SVM) to Improve Robustness of the Classifier.
Tkachev V, Sorokin M, Mescheryakov A, Simonov A, Garazha A, Buzdin A, Muchnik I, Borisov N.
Tkachev V, et al.
Front Genet. 2019 Jan 15;9:717. doi: 10.3389/fgene.2018.00717. eCollection 2018.
Front Genet. 2019.
PMID: 30697229
Free PMC article.
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Experimental and Meta-Analytic Validation of RNA Sequencing Signatures for Predicting Status of Microsatellite Instability.
Sorokin M, Rabushko E, Efimov V, Poddubskaya E, Sekacheva M, Simonov A, Nikitin D, Drobyshev A, Suntsova M, Buzdin A.
Sorokin M, et al.
Front Mol Biosci. 2021 Nov 23;8:737821. doi: 10.3389/fmolb.2021.737821. eCollection 2021.
Front Mol Biosci. 2021.
PMID: 34888350
Free PMC article.
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Next-Generation Grade and Survival Expression Biomarkers of Human Gliomas Based on Algorithmically Reconstructed Molecular Pathways.
Zolotovskaia MA, Kovalenko MA, Tkachev VS, Simonov AM, Sorokin MI, Kim E, Kuzmin DV, Karademir-Yilmaz B, Buzdin AA.
Zolotovskaia MA, et al. Among authors: simonov am.
Int J Mol Sci. 2022 Jun 30;23(13):7330. doi: 10.3390/ijms23137330.
Int J Mol Sci. 2022.
PMID: 35806337
Free PMC article.
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Uniformly shaped harmonization combines human transcriptomic data from different platforms while retaining their biological properties and differential gene expression patterns.
Borisov N, Tkachev V, Simonov A, Sorokin M, Kim E, Kuzmin D, Karademir-Yilmaz B, Buzdin A.
Borisov N, et al.
Front Mol Biosci. 2023 Sep 6;10:1237129. doi: 10.3389/fmolb.2023.1237129. eCollection 2023.
Front Mol Biosci. 2023.
PMID: 37745690
Free PMC article.
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Algorithmically Reconstructed Molecular Pathways as the New Generation of Prognostic Molecular Biomarkers in Human Solid Cancers.
Zolotovskaia M, Kovalenko M, Pugacheva P, Tkachev V, Simonov A, Sorokin M, Seryakov A, Garazha A, Gaifullin N, Sekacheva M, Zakharova G, Buzdin AA.
Zolotovskaia M, et al.
Proteomes. 2023 Aug 25;11(3):26. doi: 10.3390/proteomes11030026.
Proteomes. 2023.
PMID: 37755705
Free PMC article.
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Unexpected formation of 2-nitro- and 2,2'-azobenzimidazoles.
Pozharskii AF, Zvezdina EA, Simonov AM.
Pozharskii AF, et al. Among authors: simonov am.
Tetrahedron Lett. 1967 Jun;23:2219-22. doi: 10.1016/s0040-4039(00)90800-1.
Tetrahedron Lett. 1967.
PMID: 6047540
No abstract available.
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