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Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs.
Lee BD, Neri U, Roux S, Wolf YI, Camargo AP, Krupovic M; RNA Virus Discovery Consortium; Simmonds P, Kyrpides N, Gophna U, Dolja VV, Koonin EV. Lee BD, et al. Among authors: simmonds p. Cell. 2023 Feb 2;186(3):646-661.e4. doi: 10.1016/j.cell.2022.12.039. Epub 2023 Jan 24. Cell. 2023. PMID: 36696902 Free PMC article.
Guidance for creating individual and batch latinized binomial virus species names.
Postler TS, Rubino L, Adriaenssens EM, Dutilh BE, Harrach B, Junglen S, Kropinski AM, Krupovic M, Wada J, Crane A, Kuhn JH, Mushegian A, Rūmnieks J, Sabanadzovic S, Simmonds P, Varsani A, Zerbini FM, Callanan J, Draper LA, Hill C, Stockdale SR. Postler TS, et al. Among authors: simmonds p. J Gen Virol. 2022 Dec;103(12):001800. doi: 10.1099/jgv.0.001800. J Gen Virol. 2022. PMID: 36748479 Free PMC article.
Virus taxonomy and the role of the International Committee on Taxonomy of Viruses (ICTV).
Siddell SG, Smith DB, Adriaenssens E, Alfenas-Zerbini P, Dutilh BE, Garcia ML, Junglen S, Krupovic M, Kuhn JH, Lambert AJ, Lefkowitz EJ, Łobocka M, Mushegian AR, Oksanen HM, Robertson DL, Rubino L, Sabanadzovic S, Simmonds P, Suzuki N, Van Doorslaer K, Vandamme AM, Varsani A, Zerbini FM. Siddell SG, et al. Among authors: simmonds p. J Gen Virol. 2023 May;104(5):001840. doi: 10.1099/jgv.0.001840. J Gen Virol. 2023. PMID: 37141106 Free PMC article.
Epidemiological and clinical insights into the enterovirus D68 upsurge in Europe 2021/22 and the emergence of novel B3-derived lineages, ENPEN multicentre study.
Simoes MP, Hodcroft EB, Simmonds P, Albert J, Alidjinou EK, Ambert-Balay K, Andrés C, Antón A, Auvray C, Bailly JL, Baldanti F, Bastings C, Beard S, Pereira CB, Berginc N, Bloemen M, Blomqvist S, Bosma F, Böttcher S, Bubba L, Buderus S, Cabrerizo M, Calvo C, Celma C, Ceriotti F, Clark G, Costa I, Coste-Burel M, Couderé K, Cremer J, Del Cuerpo Casas M, Daehne T, de Beer J, de Ceano-Vivas M, De Gascun C, de Rougemont A, Dean J, Dembinski JL, Diedrich S, Diez-Domingo J, Dillner L, Dorenberg DH, Ducancelle A, Dudman S, Dyrdak R, Eis-Huebinger AM, Falces-Romero I, Farkas A, Feeney S, Fernandez-Garcia MD, Flipse J, Franck KT, Galli C, Garrigue I, Geeraedts F, Georgieva I, Giardina F, Guiomar R, Hauzenberger E, Heikens E, Henquell C, Hober D, Hönemann A, Howson-Wells H, Hruškar Ž, Ikonen N, Imbert B, Jansz AR, Jeannoël M, Jiřincová H, Josset L, Keeren K, Kramer-Lindhout N, Krokstad S, Lazrek M, Le Guillou-Guillemette H, Lefeuvre C, Lind A, Lunar MM, Maier M, Marque-Juillet S, McClure CP, McKenna J, Meijer A, Menasalvas Ruiz A, Mengual-Chuliá B, Midgley S, Mirand A, Molenkamp R, Montes M, Moreno-Docón A, Morley U, Murk JL, Navascués-Ortega A, Nijhuis R, Nikolaeva-Glomb L, Nordbø SA… See abstract for full author list ➔ Simoes MP, et al. Among authors: simmonds p. J Infect Dis. 2024 Mar 28:jiae154. doi: 10.1093/infdis/jiae154. Online ahead of print. J Infect Dis. 2024. PMID: 38547499 Free article.
Parechovirus A Circulation and Testing Capacities in Europe, 2015-2021.
Bubba L, Broberg EK, Fischer TK, Simmonds P, Harvala H; European Non-polio Enterovirus Network working group. Bubba L, et al. Among authors: simmonds p. Emerg Infect Dis. 2024 Feb;30(2):234-244. doi: 10.3201/eid3002.230647. Emerg Infect Dis. 2024. PMID: 38270192 Free PMC article. Review.
Phylogenetic Analysis of Hepatitis C Virus Infections in a Large Belgian Cohort Using Next-Generation Sequencing of Full-Length Genomes.
Christensen KT, Pierard F, Bonsall D, Bowden R, Barnes E, Florence E, Ansari MA, Nguyen D, de Cesare M, Nevens F, Robaeys G, Schrooten Y, Busschots D, Simmonds P, Vandamme AM, Van Wijngaerden E, Dierckx T, Cuypers L, Van Laethem K. Christensen KT, et al. Among authors: simmonds p. Viruses. 2023 Dec 8;15(12):2391. doi: 10.3390/v15122391. Viruses. 2023. PMID: 38140632 Free PMC article.
Genetic diversity of RNA viruses infecting invertebrate pests of rice.
Wang H, Chao S, Yan Q, Zhang S, Chen G, Mao C, Hu Y, Yu F, Wang S, Lv L, Yang B, He J, Zhang S, Zhang L, Simmonds P, Feng G. Wang H, et al. Among authors: simmonds p. Sci China Life Sci. 2024 Jan;67(1):175-187. doi: 10.1007/s11427-023-2398-y. Epub 2023 Nov 7. Sci China Life Sci. 2024. PMID: 37946067
726 results