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Electrical and synaptic integration of glioma into neural circuits.
Venkatesh HS, Morishita W, Geraghty AC, Silverbush D, Gillespie SM, Arzt M, Tam LT, Espenel C, Ponnuswami A, Ni L, Woo PJ, Taylor KR, Agarwal A, Regev A, Brang D, Vogel H, Hervey-Jumper S, Bergles DE, Suvà ML, Malenka RC, Monje M. Venkatesh HS, et al. Among authors: silverbush d. Nature. 2019 Sep;573(7775):539-545. doi: 10.1038/s41586-019-1563-y. Epub 2019 Sep 18. Nature. 2019. PMID: 31534222 Free PMC article.
Epigenetic encoding, heritability and plasticity of glioma transcriptional cell states.
Chaligne R, Gaiti F, Silverbush D, Schiffman JS, Weisman HR, Kluegel L, Gritsch S, Deochand SD, Gonzalez Castro LN, Richman AR, Klughammer J, Biancalani T, Muus C, Sheridan C, Alonso A, Izzo F, Park J, Rozenblatt-Rosen O, Regev A, Suvà ML, Landau DA. Chaligne R, et al. Among authors: silverbush d. Nat Genet. 2021 Oct;53(10):1469-1479. doi: 10.1038/s41588-021-00927-7. Epub 2021 Sep 30. Nat Genet. 2021. PMID: 34594037 Free PMC article.
An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma.
Neftel C, Laffy J, Filbin MG, Hara T, Shore ME, Rahme GJ, Richman AR, Silverbush D, Shaw ML, Hebert CM, Dewitt J, Gritsch S, Perez EM, Gonzalez Castro LN, Lan X, Druck N, Rodman C, Dionne D, Kaplan A, Bertalan MS, Small J, Pelton K, Becker S, Bonal D, Nguyen QD, Servis RL, Fung JM, Mylvaganam R, Mayr L, Gojo J, Haberler C, Geyeregger R, Czech T, Slavc I, Nahed BV, Curry WT, Carter BS, Wakimoto H, Brastianos PK, Batchelor TT, Stemmer-Rachamimov A, Martinez-Lage M, Frosch MP, Stamenkovic I, Riggi N, Rheinbay E, Monje M, Rozenblatt-Rosen O, Cahill DP, Patel AP, Hunter T, Verma IM, Ligon KL, Louis DN, Regev A, Bernstein BE, Tirosh I, Suvà ML. Neftel C, et al. Among authors: silverbush d. Cell. 2019 Aug 8;178(4):835-849.e21. doi: 10.1016/j.cell.2019.06.024. Epub 2019 Jul 18. Cell. 2019. PMID: 31327527 Free PMC article.
Network orientation via shortest paths.
Silverbush D, Sharan R. Silverbush D, et al. Bioinformatics. 2014 May 15;30(10):1449-55. doi: 10.1093/bioinformatics/btu043. Epub 2014 Jan 27. Bioinformatics. 2014. PMID: 24470573
Optimally orienting physical networks.
Silverbush D, Elberfeld M, Sharan R. Silverbush D, et al. J Comput Biol. 2011 Nov;18(11):1437-48. doi: 10.1089/cmb.2011.0163. Epub 2011 Oct 14. J Comput Biol. 2011. PMID: 21999286
ANAT 2.0: reconstructing functional protein subnetworks.
Almozlino Y, Atias N, Silverbush D, Sharan R. Almozlino Y, et al. Among authors: silverbush d. BMC Bioinformatics. 2017 Nov 16;18(1):495. doi: 10.1186/s12859-017-1932-1. BMC Bioinformatics. 2017. PMID: 29145805 Free PMC article.
15 results