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Ten quick tips for deep learning in biology.
Lee BD, Gitter A, Greene CS, Raschka S, Maguire F, Titus AJ, Kessler MD, Lee AJ, Chevrette MG, Stewart PA, Britto-Borges T, Cofer EM, Yu KH, Carmona JJ, Fertig EJ, Kalinin AA, Signal B, Lengerich BJ, Triche TJ Jr, Boca SM. Lee BD, et al. Among authors: signal b. PLoS Comput Biol. 2022 Mar 24;18(3):e1009803. doi: 10.1371/journal.pcbi.1009803. eCollection 2022 Mar. PLoS Comput Biol. 2022. PMID: 35324884 Free PMC article. No abstract available.
Chemotaxis shapes the microscale organization of the ocean's microbiome.
Raina JB, Lambert BS, Parks DH, Rinke C, Siboni N, Bramucci A, Ostrowski M, Signal B, Lutz A, Mendis H, Rubino F, Fernandez VI, Stocker R, Hugenholtz P, Tyson GW, Seymour JR. Raina JB, et al. Among authors: signal b. Nature. 2022 May;605(7908):132-138. doi: 10.1038/s41586-022-04614-3. Epub 2022 Apr 20. Nature. 2022. PMID: 35444277
The splicing effect of variants at branchpoint elements in cancer genes.
Canson DM, Dumenil T, Parsons MT, O'Mara TA, Davidson AL, Okano S, Signal B, Mercer TR, Glubb DM, Spurdle AB. Canson DM, et al. Among authors: signal b. Genet Med. 2023 Jan;25(1):166. doi: 10.1016/j.gim.2022.11.015. Genet Med. 2023. PMID: 36609150 Free article. No abstract available.
The splicing effect of variants at branchpoint elements in cancer genes.
Canson DM, Dumenil T, Parsons MT, O'Mara TA, Davidson AL, Okano S, Signal B, Mercer TR, Glubb DM, Spurdle AB. Canson DM, et al. Among authors: signal b. Genet Med. 2022 Feb;24(2):398-409. doi: 10.1016/j.gim.2021.09.020. Epub 2021 Nov 30. Genet Med. 2022. PMID: 34906448 Free article.
Machine learning annotation of human branchpoints.
Signal B, Gloss BS, Dinger ME, Mercer TR. Signal B, et al. Bioinformatics. 2018 Mar 15;34(6):920-927. doi: 10.1093/bioinformatics/btx688. Bioinformatics. 2018. PMID: 29092009
16 results