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BTLA-derived peptides as inhibitors of BTLA/HVEM complex formation - design, synthesis and biological evaluation.
Kuncewicz K, Bojko M, Battin C, Karczyńska A, Sieradzan A, Sikorska E, Węgrzyn K, Wojciechowicz K, Wardowska A, Steinberger P, Rodziewicz-Motowidło S, Spodzieja M. Kuncewicz K, et al. Among authors: sieradzan a. Biomed Pharmacother. 2023 Sep;165:115161. doi: 10.1016/j.biopha.2023.115161. Epub 2023 Jul 19. Biomed Pharmacother. 2023. PMID: 37473684 Free article.
Performance of protein-structure predictions with the physics-based UNRES force field in CASP11.
Krupa P, Mozolewska MA, Wiśniewska M, Yin Y, He Y, Sieradzan AK, Ganzynkowicz R, Lipska AG, Karczyńska A, Ślusarz M, Ślusarz R, Giełdoń A, Czaplewski C, Jagieła D, Zaborowski B, Scheraga HA, Liwo A. Krupa P, et al. Among authors: sieradzan ak. Bioinformatics. 2016 Nov 1;32(21):3270-3278. doi: 10.1093/bioinformatics/btw404. Epub 2016 Jul 4. Bioinformatics. 2016. PMID: 27378298 Free PMC article.
Evaluation of the scale-consistent UNRES force field in template-free prediction of protein structures in the CASP13 experiment.
Lubecka EA, Karczyńska AS, Lipska AG, Sieradzan AK, Ziȩba K, Sikorska C, Uciechowska U, Samsonov SA, Krupa P, Mozolewska MA, Golon Ł, Giełdoń A, Czaplewski C, Ślusarz R, Ślusarz M, Crivelli SN, Liwo A. Lubecka EA, et al. Among authors: sieradzan ak. J Mol Graph Model. 2019 Nov;92:154-166. doi: 10.1016/j.jmgm.2019.07.013. Epub 2019 Jul 26. J Mol Graph Model. 2019. PMID: 31376733
Disulfide-Linked Peptides for Blocking BTLA/HVEM Binding.
Spodzieja M, Kuncewicz K, Sieradzan A, Karczyńska A, Iwaszkiewicz J, Cesson V, Węgrzyn K, Zhukov I, Maszota-Zieleniak M, Michielin O, Speiser DE, Zoete V, Derré L, Rodziewicz-Motowidło S. Spodzieja M, et al. Among authors: sieradzan a. Int J Mol Sci. 2020 Jan 18;21(2):636. doi: 10.3390/ijms21020636. Int J Mol Sci. 2020. PMID: 31963646 Free PMC article.
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13.
Karczyńska AS, Ziȩba K, Uciechowska U, Mozolewska MA, Krupa P, Lubecka EA, Lipska AG, Sikorska C, Samsonov SA, Sieradzan AK, Giełdoń A, Liwo A, Ślusarz R, Ślusarz M, Lee J, Joo K, Czaplewski C. Karczyńska AS, et al. Among authors: sieradzan ak. J Chem Inf Model. 2020 Mar 23;60(3):1844-1864. doi: 10.1021/acs.jcim.9b00864. Epub 2020 Feb 11. J Chem Inf Model. 2020. PMID: 31999919 Free PMC article.
Scale-consistent approach to the derivation of coarse-grained force fields for simulating structure, dynamics, and thermodynamics of biopolymers.
Liwo A, Czaplewski C, Sieradzan AK, Lubecka EA, Lipska AG, Golon Ł, Karczyńska A, Krupa P, Mozolewska MA, Makowski M, Ganzynkowicz R, Giełdoń A, Maciejczyk M. Liwo A, et al. Among authors: sieradzan ak. Prog Mol Biol Transl Sci. 2020;170:73-122. doi: 10.1016/bs.pmbts.2019.12.004. Epub 2020 Feb 24. Prog Mol Biol Transl Sci. 2020. PMID: 32145953
Truncation of Huia versabilis Bowman-Birk inhibitor increases its selectivity, matriptase-1 inhibitory activity and proteolytic stability.
Gitlin-Domagalska A, Dębowski D, Gucwa K, Starego D, Ptaszyńska N, Sieradzan A, Karczyńska A, Samsonov SA, Mangold M, Gütschow M, Łęgowska A, Rolka K. Gitlin-Domagalska A, et al. Among authors: sieradzan a. Biochimie. 2020 Apr-May;171-172:178-186. doi: 10.1016/j.biochi.2020.03.006. Epub 2020 Mar 10. Biochimie. 2020. PMID: 32169666
82 results