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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2011 1
2012 1
2013 1
2014 8
2015 9
2016 5
2017 5
2018 12
2019 10
2020 10
2021 9
2022 11
2023 7
2024 5

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89 results

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Page 1
Complexity of avian evolution revealed by family-level genomes.
Stiller J, Feng S, Chowdhury AA, Rivas-González I, Duchêne DA, Fang Q, Deng Y, Kozlov A, Stamatakis A, Claramunt S, Nguyen JMT, Ho SYW, Faircloth BC, Haag J, Houde P, Cracraft J, Balaban M, Mai U, Chen G, Gao R, Zhou C, Xie Y, Huang Z, Cao Z, Yan Z, Ogilvie HA, Nakhleh L, Lindow B, Morel B, Fjeldså J, Hosner PA, da Fonseca RR, Petersen B, Tobias JA, Székely T, Kennedy JD, Reeve AH, Liker A, Stervander M, Antunes A, Tietze DT, Bertelsen MF, Lei F, Rahbek C, Graves GR, Schierup MH, Warnow T, Braun EL, Gilbert MTP, Jarvis ED, Mirarab S, Zhang G. Stiller J, et al. Among authors: mirarab s. Nature. 2024 Apr 1. doi: 10.1038/s41586-024-07323-1. Online ahead of print. Nature. 2024. PMID: 38560995
A region of suppressed recombination misleads neoavian phylogenomics.
Mirarab S, Rivas-González I, Feng S, Stiller J, Fang Q, Mai U, Hickey G, Chen G, Brajuka N, Fedrigo O, Formenti G, Wolf JBW, Howe K, Antunes A, Schierup MH, Paten B, Jarvis ED, Zhang G, Braun EL. Mirarab S, et al. Proc Natl Acad Sci U S A. 2024 Apr 9;121(15):e2319506121. doi: 10.1073/pnas.2319506121. Epub 2024 Apr 1. Proc Natl Acad Sci U S A. 2024. PMID: 38557186 Free PMC article.
Author Correction: Greengenes2 unifies microbial data in a single reference tree.
McDonald D, Jiang Y, Balaban M, Cantrell K, Zhu Q, Gonzalez A, Morton JT, Nicolaou G, Parks DH, Karst SM, Albertsen M, Hugenholtz P, DeSantis T, Song SJ, Bartko A, Havulinna AS, Jousilahti P, Cheng S, Inouye M, Niiranen T, Jain M, Salomaa V, Lahti L, Mirarab S, Knight R. McDonald D, et al. Among authors: mirarab s. Nat Biotechnol. 2023 Oct 18. doi: 10.1038/s41587-023-02026-w. Online ahead of print. Nat Biotechnol. 2023. PMID: 37853258 No abstract available.
Generation of accurate, expandable phylogenomic trees with uDance.
Balaban M, Jiang Y, Zhu Q, McDonald D, Knight R, Mirarab S. Balaban M, et al. Among authors: mirarab s. Nat Biotechnol. 2023 Jul 27:10.1038/s41587-023-01868-8. doi: 10.1038/s41587-023-01868-8. Online ahead of print. Nat Biotechnol. 2023. PMID: 37500914
Greengenes2 unifies microbial data in a single reference tree.
McDonald D, Jiang Y, Balaban M, Cantrell K, Zhu Q, Gonzalez A, Morton JT, Nicolaou G, Parks DH, Karst SM, Albertsen M, Hugenholtz P, DeSantis T, Song SJ, Bartko A, Havulinna AS, Jousilahti P, Cheng S, Inouye M, Niiranen T, Jain M, Salomaa V, Lahti L, Mirarab S, Knight R. McDonald D, et al. Among authors: mirarab s. Nat Biotechnol. 2023 Jul 27:10.1038/s41587-023-01845-1. doi: 10.1038/s41587-023-01845-1. Online ahead of print. Nat Biotechnol. 2023. PMID: 37500913
Phylogenomic branch length estimation using quartets.
Tabatabaee Y, Zhang C, Warnow T, Mirarab S. Tabatabaee Y, et al. Among authors: mirarab s. Bioinformatics. 2023 Jun 30;39(39 Suppl 1):i185-i193. doi: 10.1093/bioinformatics/btad221. Bioinformatics. 2023. PMID: 37387151 Free PMC article.
89 results