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Page 1
Antigen receptor repertoire profiling from RNA-seq data.
Bolotin DA, Poslavsky S, Davydov AN, Frenkel FE, Fanchi L, Zolotareva OI, Hemmers S, Putintseva EV, Obraztsova AS, Shugay M, Ataullakhanov RI, Rudensky AY, Schumacher TN, Chudakov DM. Bolotin DA, et al. Among authors: shugay m. Nat Biotechnol. 2017 Oct 11;35(10):908-911. doi: 10.1038/nbt.3979. Nat Biotechnol. 2017. PMID: 29020005 Free PMC article. No abstract available.
Pairing of T-cell receptor chains via emulsion PCR.
Turchaninova MA, Britanova OV, Bolotin DA, Shugay M, Putintseva EV, Staroverov DB, Sharonov G, Shcherbo D, Zvyagin IV, Mamedov IZ, Linnemann C, Schumacher TN, Chudakov DM. Turchaninova MA, et al. Among authors: shugay m. Eur J Immunol. 2013 Sep;43(9):2507-15. doi: 10.1002/eji.201343453. Epub 2013 Jun 26. Eur J Immunol. 2013. PMID: 23696157 Free article.
MiTCR: software for T-cell receptor sequencing data analysis.
Bolotin DA, Shugay M, Mamedov IZ, Putintseva EV, Turchaninova MA, Zvyagin IV, Britanova OV, Chudakov DM. Bolotin DA, et al. Among authors: shugay m. Nat Methods. 2013 Sep;10(9):813-4. doi: 10.1038/nmeth.2555. Epub 2013 Jul 28. Nat Methods. 2013. PMID: 23892897 No abstract available.
Mother and child T cell receptor repertoires: deep profiling study.
Putintseva EV, Britanova OV, Staroverov DB, Merzlyak EM, Turchaninova MA, Shugay M, Bolotin DA, Pogorelyy MV, Mamedov IZ, Bobrynina V, Maschan M, Lebedev YB, Chudakov DM. Putintseva EV, et al. Among authors: shugay m. Front Immunol. 2013 Dec 25;4:463. doi: 10.3389/fimmu.2013.00463. eCollection 2013. Front Immunol. 2013. PMID: 24400004 Free PMC article.
Huge Overlap of Individual TCR Beta Repertoires.
Shugay M, Bolotin DA, Putintseva EV, Pogorelyy MV, Mamedov IZ, Chudakov DM. Shugay M, et al. Front Immunol. 2013 Dec 25;4:466. doi: 10.3389/fimmu.2013.00466. eCollection 2013. Front Immunol. 2013. PMID: 24400005 Free PMC article. No abstract available.
Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing.
Zvyagin IV, Pogorelyy MV, Ivanova ME, Komech EA, Shugay M, Bolotin DA, Shelenkov AA, Kurnosov AA, Staroverov DB, Chudakov DM, Lebedev YB, Mamedov IZ. Zvyagin IV, et al. Among authors: shugay m. Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):5980-5. doi: 10.1073/pnas.1319389111. Epub 2014 Apr 7. Proc Natl Acad Sci U S A. 2014. PMID: 24711416 Free PMC article.
Towards error-free profiling of immune repertoires.
Shugay M, Britanova OV, Merzlyak EM, Turchaninova MA, Mamedov IZ, Tuganbaev TR, Bolotin DA, Staroverov DB, Putintseva EV, Plevova K, Linnemann C, Shagin D, Pospisilova S, Lukyanov S, Schumacher TN, Chudakov DM. Shugay M, et al. Nat Methods. 2014 Jun;11(6):653-5. doi: 10.1038/nmeth.2960. Epub 2014 May 4. Nat Methods. 2014. PMID: 24793455
MiXCR: software for comprehensive adaptive immunity profiling.
Bolotin DA, Poslavsky S, Mitrophanov I, Shugay M, Mamedov IZ, Putintseva EV, Chudakov DM. Bolotin DA, et al. Among authors: shugay m. Nat Methods. 2015 May;12(5):380-1. doi: 10.1038/nmeth.3364. Nat Methods. 2015. PMID: 25924071 No abstract available.
66 results