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Inhibition of the hexosamine biosynthetic pathway promotes castration-resistant prostate cancer.
Kaushik AK, Shojaie A, Panzitt K, Sonavane R, Venghatakrishnan H, Manikkam M, Zaslavsky A, Putluri V, Vasu VT, Zhang Y, Khan AS, Lloyd S, Szafran AT, Dasgupta S, Bader DA, Stossi F, Li H, Samanta S, Cao X, Tsouko E, Huang S, Frigo DE, Chan L, Edwards DP, Kaipparettu BA, Mitsiades N, Weigel NL, Mancini M, McGuire SE, Mehra R, Ittmann MM, Chinnaiyan AM, Putluri N, Palapattu GS, Michailidis G, Sreekumar A. Kaushik AK, et al. Among authors: shojaie a. Nat Commun. 2016 May 19;7:11612. doi: 10.1038/ncomms11612. Nat Commun. 2016. PMID: 27194471 Free PMC article.
Network enrichment analysis in complex experiments.
Shojaie A, Michailidis G. Shojaie A, et al. Stat Appl Genet Mol Biol. 2010;9(1):Article22. doi: 10.2202/1544-6115.1483. Epub 2010 May 22. Stat Appl Genet Mol Biol. 2010. PMID: 20597848 Free PMC article.
Discovering graphical Granger causality using the truncating lasso penalty.
Shojaie A, Michailidis G. Shojaie A, et al. Bioinformatics. 2010 Sep 15;26(18):i517-23. doi: 10.1093/bioinformatics/btq377. Bioinformatics. 2010. PMID: 20823316 Free PMC article.
Whole-genome expression data over time provides an opportunity to determine how the expression levels of genes are affected by changes in transcription levels of other genes, and can therefore be used to discover regulatory interactions among genes. RESULTS: In this article, we p …
Whole-genome expression data over time provides an opportunity to determine how the expression levels of genes are affected by changes in tr …
Metabolomic profiling reveals a role for androgen in activating amino acid metabolism and methylation in prostate cancer cells.
Putluri N, Shojaie A, Vasu VT, Nalluri S, Vareed SK, Putluri V, Vivekanandan-Giri A, Byun J, Pennathur S, Sana TR, Fischer SM, Palapattu GS, Creighton CJ, Michailidis G, Sreekumar A. Putluri N, et al. Among authors: shojaie a. PLoS One. 2011;6(7):e21417. doi: 10.1371/journal.pone.0021417. Epub 2011 Jul 18. PLoS One. 2011. PMID: 21789170 Free PMC article.
Metabolomic profiling reveals potential markers and bioprocesses altered in bladder cancer progression.
Putluri N, Shojaie A, Vasu VT, Vareed SK, Nalluri S, Putluri V, Thangjam GS, Panzitt K, Tallman CT, Butler C, Sana TR, Fischer SM, Sica G, Brat DJ, Shi H, Palapattu GS, Lotan Y, Weizer AZ, Terris MK, Shariat SF, Michailidis G, Sreekumar A. Putluri N, et al. Among authors: shojaie a. Cancer Res. 2011 Dec 15;71(24):7376-86. doi: 10.1158/0008-5472.CAN-11-1154. Epub 2011 Oct 11. Cancer Res. 2011. PMID: 21990318 Free PMC article.
Metabolomic profiling identifies biochemical pathways associated with castration-resistant prostate cancer.
Kaushik AK, Vareed SK, Basu S, Putluri V, Putluri N, Panzitt K, Brennan CA, Chinnaiyan AM, Vergara IA, Erho N, Weigel NL, Mitsiades N, Shojaie A, Palapattu G, Michailidis G, Sreekumar A. Kaushik AK, et al. Among authors: shojaie a. J Proteome Res. 2014 Feb 7;13(2):1088-100. doi: 10.1021/pr401106h. Epub 2013 Dec 31. J Proteome Res. 2014. PMID: 24359151 Free PMC article.
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