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Site-Specific Steric Control of SARS-CoV-2 Spike Glycosylation.
Biochemistry. 2021 Jul 13;60(27):2153-2169. doi: 10.1021/acs.biochem.1c00279. Epub 2021 Jul 2.
Biochemistry. 2021.
PMID: 34213308
Free PMC article.
Uncovering cryptic pockets in the SARS-CoV-2 spike glycoprotein.
Zuzic L, Samsudin F, Shivgan AT, Raghuvamsi PV, Marzinek JK, Boags A, Pedebos C, Tulsian NK, Warwicker J, MacAry P, Crispin M, Khalid S, Anand GS, Bond PJ.
Zuzic L, et al. Among authors: shivgan at.
Structure. 2022 Aug 4;30(8):1062-1074.e4. doi: 10.1016/j.str.2022.05.006. Epub 2022 Jun 3.
Structure. 2022.
PMID: 35660160
Free PMC article.
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Extending the Martini Coarse-Grained Force Field to N-Glycans.
Shivgan AT, Marzinek JK, Huber RG, Krah A, Henchman RH, Matsudaira P, Verma CS, Bond PJ.
Shivgan AT, et al.
J Chem Inf Model. 2020 Aug 24;60(8):3864-3883. doi: 10.1021/acs.jcim.0c00495. Epub 2020 Jul 23.
J Chem Inf Model. 2020.
PMID: 32702979
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Coarse-Grained Model of Glycosaminoglycans for Biomolecular Simulations.
Shivgan AT, Marzinek JK, Krah A, Matsudaira P, Verma CS, Bond PJ.
Shivgan AT, et al.
J Chem Theory Comput. 2024 Apr 23;20(8):3308-3321. doi: 10.1021/acs.jctc.3c01088. Epub 2024 Feb 15.
J Chem Theory Comput. 2024.
PMID: 38358378
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Site-specific steric control of SARS-CoV-2 spike glycosylation.
Allen JD, Chawla H, Samsudin F, Zuzic L, Shivgan AT, Watanabe Y, He WT, Callaghan S, Song G, Yong P, Brouwer PJM, Song Y, Cai Y, Duyvesteyn HME, Malinauskas T, Kint J, Pino P, Wurm MJ, Frank M, Chen B, Stuart DI, Sanders RW, Andrabi R, Burton DR, Li S, Bond PJ, Crispin M.
Allen JD, et al. Among authors: shivgan at.
bioRxiv [Preprint]. 2021 Mar 9:2021.03.08.433764. doi: 10.1101/2021.03.08.433764.
bioRxiv. 2021.
PMID: 33758835
Free PMC article.
Updated.
Preprint.
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