Shivakumar M - Search Results

1

NETMAGE: A human disease phenotype map generator for the network-based visualization of phenome-wide association study results.

Sriram V, Shivakumar M, Jung SH, Nam Y, Bang L, Verma A, Lee S, Choe EK, Kim D. Sriram V, et al. Among authors: shivakumar m. Gigascience. 2022 Feb 15;11:giac002. doi: 10.1093/gigascience/giac002. Gigascience. 2022. PMID: 35166337 Free PMC article.

2

Identification of epigenetic interactions between miRNA and DNA methylation associated with gene expression as potential prognostic markers in bladder cancer.

Shivakumar M, Lee Y, Bang L, Garg T, Sohn KA, Kim D. Shivakumar M, et al. BMC Med Genomics. 2017 May 24;10(Suppl 1):30. doi: 10.1186/s12920-017-0269-y. BMC Med Genomics. 2017. PMID: 28589857 Free PMC article.

3

Codon bias among synonymous rare variants is associated with Alzheimer's disease imaging biomarker.

Miller JE, Shivakumar MK, Risacher SL, Saykin AJ, Lee S, Nho K, Kim D. Miller JE, et al. Pac Symp Biocomput. 2018;23:365-376. Pac Symp Biocomput. 2018. PMID: 29218897 Free PMC article.

4

The effects of alternative splicing on miRNA binding sites in bladder cancer.

Han S, Kim D, Shivakumar M, Lee YJ, Garg T, Miller JE, Kim JH, Kim D, Lee Y. Han S, et al. Among authors: shivakumar m. PLoS One. 2018 Jan 4;13(1):e0190708. doi: 10.1371/journal.pone.0190708. eCollection 2018. PLoS One. 2018. PMID: 29300757 Free PMC article.

5

Min-redundancy and max-relevance multi-view feature selection for predicting ovarian cancer survival using multi-omics data.

El-Manzalawy Y, Hsieh TY, Shivakumar M, Kim D, Honavar V. El-Manzalawy Y, et al. Among authors: shivakumar m. BMC Med Genomics. 2018 Sep 14;11(Suppl 3):71. doi: 10.1186/s12920-018-0388-0. BMC Med Genomics. 2018. PMID: 30255801 Free PMC article.

6

Rare variants in the splicing regulatory elements of EXOC3L4 are associated with brain glucose metabolism in Alzheimer's disease.

Miller JE, Shivakumar MK, Lee Y, Han S, Horgousluoglu E, Risacher SL, Saykin AJ, Nho K, Kim D; Alzheimer’s Disease Neuroimaging Initiative. Miller JE, et al. BMC Med Genomics. 2018 Sep 14;11(Suppl 3):76. doi: 10.1186/s12920-018-0390-6. BMC Med Genomics. 2018. PMID: 30255815 Free PMC article.

7

Systematic characterization of germline variants from the DiscovEHR study endometrial carcinoma population.

Miller JE, Metpally RP, Person TN, Krishnamurthy S, Dasari VR, Shivakumar M, Lavage DR, Cook AM, Carey DJ, Ritchie MD, Kim D, Gogoi R; DiscovEHR collaboration. Miller JE, et al. Among authors: shivakumar m. BMC Med Genomics. 2019 May 3;12(1):59. doi: 10.1186/s12920-019-0504-9. BMC Med Genomics. 2019. PMID: 31053132 Free PMC article.

8

Correction to: Systematic characterization of germline variants from the DiscovEHR study endometrial carcinoma population.

Miller JE, Metpally RP, Person TN, Krishnamurthy S, Dasari VR, Shivakumar M, Lavage DR, Cook AM, Carey DJ, Ritchie MD, Kim D, Gogoi R; DiscovEHR collaboration. Miller JE, et al. Among authors: shivakumar m. BMC Med Genomics. 2019 May 22;12(1):65. doi: 10.1186/s12920-019-0523-6. BMC Med Genomics. 2019. PMID: 31118041 Free PMC article.

9

Exome-Wide Rare Variant Analysis From the DiscovEHR Study Identifies Novel Candidate Predisposition Genes for Endometrial Cancer.

Shivakumar M, Miller JE, Dasari VR, Gogoi R, Kim D. Shivakumar M, et al. Front Oncol. 2019 Jul 5;9:574. doi: 10.3389/fonc.2019.00574. eCollection 2019. Front Oncol. 2019. PMID: 31338326 Free PMC article.

10

An exome-wide rare variant analysis of Korean men identifies three novel genes predisposing to prostate cancer.

Oh JJ, Shivakumar M, Miller J, Verma S, Lee H, Hong SK, Lee SE, Lee Y, Lee SJ, Sung J, Kim D, Byun SS. Oh JJ, et al. Among authors: shivakumar m. Sci Rep. 2019 Nov 20;9(1):17173. doi: 10.1038/s41598-019-53445-2. Sci Rep. 2019. PMID: 31748686 Free PMC article.

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