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Applications of Artificial Intelligence, Machine Learning, Big Data and the Internet of Things to the COVID-19 Pandemic: A Scientometric Review Using Text Mining.
Rodríguez-Rodríguez I, Rodríguez JV, Shirvanizadeh N, Ortiz A, Pardo-Quiles DJ. Rodríguez-Rodríguez I, et al. Among authors: shirvanizadeh n. Int J Environ Res Public Health. 2021 Aug 13;18(16):8578. doi: 10.3390/ijerph18168578. Int J Environ Res Public Health. 2021. PMID: 34444327 Free PMC article. Review.
VariBench, new variation benchmark categories and data sets.
Shirvanizadeh N, Vihinen M. Shirvanizadeh N, et al. Front Bioinform. 2023 Sep 19;3:1248732. doi: 10.3389/fbinf.2023.1248732. eCollection 2023. Front Bioinform. 2023. PMID: 37795169 Free PMC article. No abstract available.
MODOMICS: a database of RNA modification pathways. 2021 update.
Boccaletto P, Stefaniak F, Ray A, Cappannini A, Mukherjee S, Purta E, Kurkowska M, Shirvanizadeh N, Destefanis E, Groza P, Avşar G, Romitelli A, Pir P, Dassi E, Conticello SG, Aguilo F, Bujnicki JM. Boccaletto P, et al. Among authors: shirvanizadeh n. Nucleic Acids Res. 2022 Jan 7;50(D1):D231-D235. doi: 10.1093/nar/gkab1083. Nucleic Acids Res. 2022. PMID: 34893873 Free PMC article.
OligoCOOL: A mobile application for nucleotide sequence analysis.
Khorsand B, Khammari A, Shirvanizadeh N, Zahiri J, Arab SS. Khorsand B, et al. Among authors: shirvanizadeh n. Biochem Mol Biol Educ. 2019 Mar;47(2):201-206. doi: 10.1002/bmb.21213. Epub 2019 Jan 25. Biochem Mol Biol Educ. 2019. PMID: 30681253 Free article.
Loop modelling 1.0.
Shirvanizadeh N, Vriend G, Arab SS. Shirvanizadeh N, et al. J Mol Graph Model. 2018 Sep;84:64-68. doi: 10.1016/j.jmgm.2018.06.001. Epub 2018 Jun 7. J Mol Graph Model. 2018. PMID: 29920424