Shendure J - Search Results

1

Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome.

Fang H, Bonora G, Lewandowski JP, Thakur J, Filippova GN, Henikoff S, Shendure J, Duan Z, Rinn JL, Deng X, Noble WS, Disteche CM. Fang H, et al. Among authors: shendure j. Nat Commun. 2020 Nov 27;11(1):6053. doi: 10.1038/s41467-020-19879-3. Nat Commun. 2020. PMID: 33247132 Free PMC article.

2

Journal club. A geneticist discusses a way to assess the effects of disease-causing gene mutations.

Shendure J. Shendure J. Nature. 2010 Jan 28;463(7280):405. doi: 10.1038/463405e. Nature. 2010. PMID: 20110948 No abstract available.

3

Global survey of escape from X inactivation by RNA-sequencing in mouse.

Yang F, Babak T, Shendure J, Disteche CM. Yang F, et al. Among authors: shendure j. Genome Res. 2010 May;20(5):614-22. doi: 10.1101/gr.103200.109. Epub 2010 Apr 2. Genome Res. 2010. PMID: 20363980 Free PMC article.

4

A three-dimensional model of the yeast genome.

Duan Z, Andronescu M, Schutz K, McIlwain S, Kim YJ, Lee C, Shendure J, Fields S, Blau CA, Noble WS. Duan Z, et al. Among authors: shendure j. Nature. 2010 May 20;465(7296):363-7. doi: 10.1038/nature08973. Epub 2010 May 2. Nature. 2010. PMID: 20436457 Free PMC article.

5

Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster.

Deng X, Hiatt JB, Nguyen DK, Ercan S, Sturgill D, Hillier LW, Schlesinger F, Davis CA, Reinke VJ, Gingeras TR, Shendure J, Waterston RH, Oliver B, Lieb JD, Disteche CM. Deng X, et al. Among authors: shendure j. Nat Genet. 2011 Oct 23;43(12):1179-85. doi: 10.1038/ng.948. Nat Genet. 2011. PMID: 22019781 Free PMC article.

6

A genome-wide 3C-method for characterizing the three-dimensional architectures of genomes.

Duan Z, Andronescu M, Schutz K, Lee C, Shendure J, Fields S, Noble WS, Anthony Blau C. Duan Z, et al. Among authors: shendure j. Methods. 2012 Nov;58(3):277-88. doi: 10.1016/j.ymeth.2012.06.018. Epub 2012 Jul 6. Methods. 2012. PMID: 22776363 Free PMC article. Review.

7

Mammalian X upregulation is associated with enhanced transcription initiation, RNA half-life, and MOF-mediated H4K16 acetylation.

Deng X, Berletch JB, Ma W, Nguyen DK, Hiatt JB, Noble WS, Shendure J, Disteche CM. Deng X, et al. Among authors: shendure j. Dev Cell. 2013 Apr 15;25(1):55-68. doi: 10.1016/j.devcel.2013.01.028. Epub 2013 Mar 21. Dev Cell. 2013. PMID: 23523075 Free PMC article.

8

Primate evolution of the recombination regulator PRDM9.

Schwartz JJ, Roach DJ, Thomas JH, Shendure J. Schwartz JJ, et al. Among authors: shendure j. Nat Commun. 2014 Jul 8;5:4370. doi: 10.1038/ncomms5370. Nat Commun. 2014. PMID: 25001002 Free PMC article.

9

Saturation editing of genomic regions by multiplex homology-directed repair.

Findlay GM, Boyle EA, Hause RJ, Klein JC, Shendure J. Findlay GM, et al. Among authors: shendure j. Nature. 2014 Sep 4;513(7516):120-3. doi: 10.1038/nature13695. Nature. 2014. PMID: 25141179 Free PMC article.

10

Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes.

Ma W, Ay F, Lee C, Gulsoy G, Deng X, Cook S, Hesson J, Cavanaugh C, Ware CB, Krumm A, Shendure J, Blau CA, Disteche CM, Noble WS, Duan Z. Ma W, et al. Among authors: shendure j. Nat Methods. 2015 Jan;12(1):71-8. doi: 10.1038/nmeth.3205. Epub 2014 Dec 1. Nat Methods. 2015. PMID: 25437436 Free PMC article.

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