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lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements.
Gordon MG, Inoue F, Martin B, Schubach M, Agarwal V, Whalen S, Feng S, Zhao J, Ashuach T, Ziffra R, Kreimer A, Georgakopoulos-Soares I, Yosef N, Ye CJ, Pollard KS, Shendure J, Kircher M, Ahituv N. Gordon MG, et al. Among authors: shendure j. Nat Protoc. 2020 Aug;15(8):2387-2412. doi: 10.1038/s41596-020-0333-5. Epub 2020 Jul 8. Nat Protoc. 2020. PMID: 32641802 Free PMC article.
Overview of DNA sequencing strategies.
Shendure JA, Porreca GJ, Church GM. Shendure JA, et al. Curr Protoc Mol Biol. 2008 Jan;Chapter 7:Unit 7.1. doi: 10.1002/0471142727.mb0701s81. Curr Protoc Mol Biol. 2008. PMID: 18231983 Review.
Targeted enrichment of specific regions in the human genome by array hybridization.
Igartua C, Turner EH, Ng SB, Hodges E, Hannon GJ, Bhattacharjee A, Rieder MJ, Nickerson DA, Shendure J. Igartua C, et al. Among authors: shendure j. Curr Protoc Hum Genet. 2010 Jul;Chapter 18:Unit 18.3. doi: 10.1002/0471142905.hg1803s66. Curr Protoc Hum Genet. 2010. PMID: 20582915 Free PMC article.
Overview of DNA sequencing strategies.
Shendure JA, Porreca GJ, Church GM, Gardner AF, Hendrickson CL, Kieleczawa J, Slatko BE. Shendure JA, et al. Curr Protoc Mol Biol. 2011 Oct;Chapter 7:Unit7.1. doi: 10.1002/0471142727.mb0701s96. Curr Protoc Mol Biol. 2011. PMID: 21987056
Massively parallel functional dissection of mammalian enhancers in vivo.
Patwardhan RP, Hiatt JB, Witten DM, Kim MJ, Smith RP, May D, Lee C, Andrie JM, Lee SI, Cooper GM, Ahituv N, Pennacchio LA, Shendure J. Patwardhan RP, et al. Among authors: shendure j. Nat Biotechnol. 2012 Feb 26;30(3):265-70. doi: 10.1038/nbt.2136. Nat Biotechnol. 2012. PMID: 22371081 Free PMC article.
430 results