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Addressing noise in co-expression network construction.
Brief Bioinform. 2022 Jan 17;23(1):bbab495. doi: 10.1093/bib/bbab495.
Brief Bioinform. 2022.
PMID: 34850822
Free PMC article.
Review.
Uncovering biomarker genes with enriched classification potential from Hallmark gene sets.
Targonski CA, Shearer CA, Shealy BT, Smith MC, Feltus FA.
Targonski CA, et al. Among authors: shealy bt.
Sci Rep. 2019 Jul 5;9(1):9747. doi: 10.1038/s41598-019-46059-1.
Sci Rep. 2019.
PMID: 31278367
Free PMC article.
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NetExtractor: Extracting a Cerebellar Tissue Gene Regulatory Network Using Differentially Expressed High Mutual Information Binary RNA Profiles.
Husain B, Hickman AR, Hang Y, Shealy BT, Sapra K, Feltus FA.
Husain B, et al. Among authors: shealy bt.
G3 (Bethesda). 2020 Sep 2;10(9):2953-2963. doi: 10.1534/g3.120.401067.
G3 (Bethesda). 2020.
PMID: 32665353
Free PMC article.
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GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure.
Hadish JA, Biggs TD, Shealy BT, Bender MR, McKnight CB, Wytko C, Smith MC, Feltus FA, Honaas L, Ficklin SP.
Hadish JA, et al. Among authors: shealy bt.
BMC Bioinformatics. 2022 May 2;23(1):156. doi: 10.1186/s12859-022-04629-7.
BMC Bioinformatics. 2022.
PMID: 35501696
Free PMC article.
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Identification of condition-specific regulatory mechanisms in normal and cancerous human lung tissue.
Hang Y, Burns J, Shealy BT, Pauly R, Ficklin SP, Feltus FA.
Hang Y, et al. Among authors: shealy bt.
BMC Genomics. 2022 May 6;23(1):350. doi: 10.1186/s12864-022-08591-9.
BMC Genomics. 2022.
PMID: 35524179
Free PMC article.
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Cellular State Transformations Using Deep Learning for Precision Medicine Applications.
Targonski C, Bender MR, Shealy BT, Husain B, Paseman B, Smith MC, Feltus FA.
Targonski C, et al. Among authors: shealy bt.
Patterns (N Y). 2020 Aug 17;1(6):100087. doi: 10.1016/j.patter.2020.100087. eCollection 2020 Sep 11.
Patterns (N Y). 2020.
PMID: 33205131
Free PMC article.
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