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Modeling infectious epidemics.
Bjørnstad ON, Shea K, Krzywinski M, Altman N. Bjørnstad ON, et al. Among authors: shea k. Nat Methods. 2020 May;17(5):455-456. doi: 10.1038/s41592-020-0822-z. Nat Methods. 2020. PMID: 32313223 No abstract available.
Essential information: Uncertainty and optimal control of Ebola outbreaks.
Li SL, Bjørnstad ON, Ferrari MJ, Mummah R, Runge MC, Fonnesbeck CJ, Tildesley MJ, Probert WJM, Shea K. Li SL, et al. Among authors: shea k. Proc Natl Acad Sci U S A. 2017 May 30;114(22):5659-5664. doi: 10.1073/pnas.1617482114. Epub 2017 May 15. Proc Natl Acad Sci U S A. 2017. PMID: 28507121 Free PMC article.
The SEIRS model for infectious disease dynamics.
Bjørnstad ON, Shea K, Krzywinski M, Altman N. Bjørnstad ON, et al. Among authors: shea k. Nat Methods. 2020 Jun;17(6):557-558. doi: 10.1038/s41592-020-0856-2. Nat Methods. 2020. PMID: 32499633 No abstract available.
Uncertainty and the management of epidemics.
Shea K, Bjørnstad ON, Krzywinski M, Altman N. Shea K, et al. Nat Methods. 2020 Sep;17(9):867-868. doi: 10.1038/s41592-020-0943-4. Nat Methods. 2020. PMID: 32839598 No abstract available.
Strategic testing approaches for targeted disease monitoring can be used to inform pandemic decision-making.
Nichols JD, Bogich TL, Howerton E, Bjørnstad ON, Borchering RK, Ferrari M, Haran M, Jewell C, Pepin KM, Probert WJM, Pulliam JRC, Runge MC, Tildesley M, Viboud C, Shea K. Nichols JD, et al. Among authors: shea k. PLoS Biol. 2021 Jun 17;19(6):e3001307. doi: 10.1371/journal.pbio.3001307. eCollection 2021 Jun. PLoS Biol. 2021. PMID: 34138840 Free PMC article.
Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty.
Howerton E, Contamin L, Mullany LC, Qin M, Reich NG, Bents S, Borchering RK, Jung SM, Loo SL, Smith CP, Levander J, Kerr J, Espino J, van Panhuis WG, Hochheiser H, Galanti M, Yamana T, Pei S, Shaman J, Rainwater-Lovett K, Kinsey M, Tallaksen K, Wilson S, Shin L, Lemaitre JC, Kaminsky J, Hulse JD, Lee EC, McKee CD, Hill A, Karlen D, Chinazzi M, Davis JT, Mu K, Xiong X, Pastore Y Piontti A, Vespignani A, Rosenstrom ET, Ivy JS, Mayorga ME, Swann JL, España G, Cavany S, Moore S, Perkins A, Hladish T, Pillai A, Ben Toh K, Longini I Jr, Chen S, Paul R, Janies D, Thill JC, Bouchnita A, Bi K, Lachmann M, Fox SJ, Meyers LA, Srivastava A, Porebski P, Venkatramanan S, Adiga A, Lewis B, Klahn B, Outten J, Hurt B, Chen J, Mortveit H, Wilson A, Marathe M, Hoops S, Bhattacharya P, Machi D, Cadwell BL, Healy JM, Slayton RB, Johansson MA, Biggerstaff M, Truelove S, Runge MC, Shea K, Viboud C, Lessler J. Howerton E, et al. Among authors: shea k. Nat Commun. 2023 Nov 20;14(1):7260. doi: 10.1038/s41467-023-42680-x. Nat Commun. 2023. PMID: 37985664 Free PMC article.
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