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Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses.
Tyakht AV, Manolov AI, Kanygina AV, Ischenko DS, Kovarsky BA, Popenko AS, Pavlenko AV, Elizarova AV, Rakitina DV, Baikova JP, Ladygina VG, Kostryukova ES, Karpova IY, Semashko TA, Larin AK, Grigoryeva TV, Sinyagina MN, Malanin SY, Shcherbakov PL, Kharitonova AY, Khalif IL, Shapina MV, Maev IV, Andreev DN, Belousova EA, Buzunova YM, Alexeev DG, Govorun VM. Tyakht AV, et al. Among authors: shapina mv. BMC Genomics. 2018 Dec 27;19(1):968. doi: 10.1186/s12864-018-5306-5. BMC Genomics. 2018. PMID: 30587114 Free PMC article.
Genome analysis of E. coli isolated from Crohn's disease patients.
Rakitina DV, Manolov AI, Kanygina AV, Garushyants SK, Baikova JP, Alexeev DG, Ladygina VG, Kostryukova ES, Larin AK, Semashko TA, Karpova IY, Babenko VV, Ismagilova RK, Malanin SY, Gelfand MS, Ilina EN, Gorodnichev RB, Lisitsyna ES, Aleshkin GI, Scherbakov PL, Khalif IL, Shapina MV, Maev IV, Andreev DN, Govorun VM. Rakitina DV, et al. Among authors: shapina mv. BMC Genomics. 2017 Jul 19;18(1):544. doi: 10.1186/s12864-017-3917-x. BMC Genomics. 2017. PMID: 28724357 Free PMC article.
Proteomic dataset: Profiling of cultivated Echerichia coli isolates from Crohn's disease patients and healthy individuals.
Rakitina D, Baikova J, Pobeguts O, Bukato O, Butenko I, Garanina I, Levites M, Manolov A, Kanygina A, Kostryukova E, Semashko T, Karpova I, Babenko V, Scherbakov P, Khalif I, Shapina M, Parfenov A, Ruchkina I, Knyazev O, Fadeeva N, Subbotin A, Chamkin S, Pyrkh A, Ivantsova M, Govorun V. Rakitina D, et al. Data Brief. 2019 Mar 7;23:103734. doi: 10.1016/j.dib.2019.103734. eCollection 2019 Apr. Data Brief. 2019. PMID: 31372401 Free PMC article.
CANCERPREVENTIVE IN ULCERATIVE COLITIS.
Podolskaya DV, Shapina MV, Khalif IL. Podolskaya DV, et al. Among authors: shapina mv. Eksp Klin Gastroenterol. 2016;(8):4-8. Eksp Klin Gastroenterol. 2016. PMID: 29874428 Review. English, Russian.
Incidence of suboptimal response to tumor necrosis factor antagonist therapy in inflammatory bowel disease in newly industrialised countries: The EXPLORE study.
Yamamoto-Furusho JK, Al Harbi O, Armuzzi A, Chan W, Ponce de Leon E, Qian J, Shapina M, Toruner M, Tu CH, Ye BD, Guennec M, Sison C, Demuth D, Fadeeva O, Khan QMR. Yamamoto-Furusho JK, et al. Dig Liver Dis. 2020 Aug;52(8):869-877. doi: 10.1016/j.dld.2020.05.031. Epub 2020 Jun 17. Dig Liver Dis. 2020. PMID: 32563721 Free article.
Etrolizumab versus adalimumab or placebo as induction therapy for moderately to severely active ulcerative colitis (HIBISCUS): two phase 3 randomised, controlled trials.
Rubin DT, Dotan I, DuVall A, Bouhnik Y, Radford-Smith G, Higgins PDR, Mishkin DS, Arrisi P, Scalori A, Oh YS, Tole S, Chai A, Chamberlain-James K, Lacey S, McBride J, Panés J; HIBISCUS Study Group. Rubin DT, et al. Lancet Gastroenterol Hepatol. 2022 Jan;7(1):17-27. doi: 10.1016/S2468-1253(21)00338-1. Epub 2021 Nov 17. Lancet Gastroenterol Hepatol. 2022. PMID: 34798036 Clinical Trial.