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MAGERI: Computational pipeline for molecular-barcoded targeted resequencing.
Shugay M, Zaretsky AR, Shagin DA, Shagina IA, Volchenkov IA, Shelenkov AA, Lebedin MY, Bagaev DV, Lukyanov S, Chudakov DM. Shugay M, et al. Among authors: shagina ia. PLoS Comput Biol. 2017 May 5;13(5):e1005480. doi: 10.1371/journal.pcbi.1005480. eCollection 2017 May. PLoS Comput Biol. 2017. PMID: 28475621 Free PMC article.
Normalizing cDNA libraries.
Bogdanov EA, Shagina I, Barsova EV, Kelmanson I, Shagin DA, Lukyanov SA. Bogdanov EA, et al. Curr Protoc Mol Biol. 2010 Apr;Chapter 5:Unit 5.12.1-27. doi: 10.1002/0471142727.mb0512s90. Curr Protoc Mol Biol. 2010. PMID: 20373503
Normalization of full-length-enriched cDNA.
Bogdanova EA, Barsova EV, Shagina IA, Scheglov A, Anisimova V, Vagner LL, Lukyanov SA, Shagin DA. Bogdanova EA, et al. Among authors: shagina ia. Methods Mol Biol. 2011;729:85-98. doi: 10.1007/978-1-61779-065-2_6. Methods Mol Biol. 2011. PMID: 21365485
A high-throughput assay for quantitative measurement of PCR errors.
Shagin DA, Shagina IA, Zaretsky AR, Barsova EV, Kelmanson IV, Lukyanov S, Chudakov DM, Shugay M. Shagin DA, et al. Among authors: shagina ia. Sci Rep. 2017 Jun 2;7(1):2718. doi: 10.1038/s41598-017-02727-8. Sci Rep. 2017. PMID: 28578414 Free PMC article.
30 results