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Non-Small Cell Lung Cancer Testing on Reference Specimens: An Italian Multicenter Experience.
Oncol Ther. 2024 Mar;12(1):73-95. doi: 10.1007/s40487-023-00252-5. Epub 2024 Jan 11.
Oncol Ther. 2024.
PMID: 38200361
Free PMC article.
Expression Pattern of Trace Amine-Associated Receptors during Differentiation of Human Pluripotent Stem Cells to Dopaminergic Neurons.
Katolikova NV, Vaganova AN, Shafranskaya DD, Efimova EV, Malashicheva AB, Gainetdinov RR.
Katolikova NV, et al. Among authors: shafranskaya dd.
Int J Mol Sci. 2023 Oct 18;24(20):15313. doi: 10.3390/ijms242015313.
Int J Mol Sci. 2023.
PMID: 37894992
Free PMC article.
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Modulation of Notch Signaling at Early Stages of Differentiation of Human Induced Pluripotent Stem Cells to Dopaminergic Neurons.
Katolikova NV, Khudiakov AA, Shafranskaya DD, Prjibelski AD, Masharskiy AE, Mor MS, Golovkin AS, Zaytseva AK, Neganova IE, Efimova EV, Gainetdinov RR, Malashicheva AB.
Katolikova NV, et al. Among authors: shafranskaya dd.
Int J Mol Sci. 2023 Jan 11;24(2):1429. doi: 10.3390/ijms24021429.
Int J Mol Sci. 2023.
PMID: 36674941
Free PMC article.
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Pericentromeric satellite lncRNAs are induced in cancer-associated fibroblasts and regulate their functions in lung tumorigenesis.
Enukashvily NI, Ponomartsev NV, Ketkar A, Suezov R, Chubar AV, Prjibelski AD, Shafranskaya DD, Elmshäuser S, Keber CU, Stefanova VN, Akopov AL, Klingmüller U, Pfefferle PI, Stiewe T, Lauth M, Brichkina AI.
Enukashvily NI, et al. Among authors: shafranskaya dd.
Cell Death Dis. 2023 Jan 12;14(1):19. doi: 10.1038/s41419-023-05553-1.
Cell Death Dis. 2023.
PMID: 36635266
Free PMC article.
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MetaGT: A pipeline for de novo assembly of metatranscriptomes with the aid of metagenomic data.
Shafranskaya D, Kale V, Finn R, Lapidus AL, Korobeynikov A, Prjibelski AD.
Shafranskaya D, et al.
Front Microbiol. 2022 Oct 28;13:981458. doi: 10.3389/fmicb.2022.981458. eCollection 2022.
Front Microbiol. 2022.
PMID: 36386613
Free PMC article.
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Hi-C Metagenomics in the ICU: Exploring Clinically Relevant Features of Gut Microbiome in Chronically Critically Ill Patients.
Ivanova V, Chernevskaya E, Vasiluev P, Ivanov A, Tolstoganov I, Shafranskaya D, Ulyantsev V, Korobeynikov A, Razin SV, Beloborodova N, Ulianov SV, Tyakht A.
Ivanova V, et al. Among authors: shafranskaya d.
Front Microbiol. 2022 Feb 3;12:770323. doi: 10.3389/fmicb.2021.770323. eCollection 2021.
Front Microbiol. 2022.
PMID: 35185811
Free PMC article.
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Graph-Based Approaches Significantly Improve the Recovery of Antibiotic Resistance Genes From Complex Metagenomic Datasets.
Shafranskaya D, Chori A, Korobeynikov A.
Shafranskaya D, et al.
Front Microbiol. 2021 Oct 6;12:714836. doi: 10.3389/fmicb.2021.714836. eCollection 2021.
Front Microbiol. 2021.
PMID: 34690959
Free PMC article.
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Human pericentromeric tandemly repeated DNA is transcribed at the end of oocyte maturation and is associated with membraneless mitochondria-associated structures.
Dobrynin MA, Korchagina NM, Prjibelski AD, Shafranskaya D, Ostromyshenskii DI, Shunkina K, Stepanova I, Kotova AV, Podgornaya OI, Enukashvily NI.
Dobrynin MA, et al. Among authors: shafranskaya d.
Sci Rep. 2020 Nov 12;10(1):19634. doi: 10.1038/s41598-020-76628-8.
Sci Rep. 2020.
PMID: 33184340
Free PMC article.
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