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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis.
Dillies MA, Rau A, Aubert J, Hennequet-Antier C, Jeanmougin M, Servant N, Keime C, Marot G, Castel D, Estelle J, Guernec G, Jagla B, Jouneau L, Laloë D, Le Gall C, Schaëffer B, Le Crom S, Guedj M, Jaffrézic F; French StatOmique Consortium. Dillies MA, et al. Among authors: servant n. Brief Bioinform. 2013 Nov;14(6):671-83. doi: 10.1093/bib/bbs046. Epub 2012 Sep 17. Brief Bioinform. 2013. PMID: 22988256
HiTC: exploration of high-throughput 'C' experiments.
Servant N, Lajoie BR, Nora EP, Giorgetti L, Chen CJ, Heard E, Dekker J, Barillot E. Servant N, et al. Bioinformatics. 2012 Nov 1;28(21):2843-4. doi: 10.1093/bioinformatics/bts521. Epub 2012 Aug 24. Bioinformatics. 2012. PMID: 22923296 Free PMC article.
VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles.
La Rosa P, Viara E, Hupé P, Pierron G, Liva S, Neuvial P, Brito I, Lair S, Servant N, Robine N, Manié E, Brennetot C, Janoueix-Lerosey I, Raynal V, Gruel N, Rouveirol C, Stransky N, Stern MH, Delattre O, Aurias A, Radvanyi F, Barillot E. La Rosa P, et al. Among authors: servant n. Bioinformatics. 2006 Sep 1;22(17):2066-73. doi: 10.1093/bioinformatics/btl359. Epub 2006 Jul 4. Bioinformatics. 2006. PMID: 16820431
ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data.
Chen CJ, Servant N, Toedling J, Sarazin A, Marchais A, Duvernois-Berthet E, Cognat V, Colot V, Voinnet O, Heard E, Ciaudo C, Barillot E. Chen CJ, et al. Among authors: servant n. Bioinformatics. 2012 Dec 1;28(23):3147-9. doi: 10.1093/bioinformatics/bts587. Epub 2012 Oct 7. Bioinformatics. 2012. PMID: 23044543
EMA - A R package for Easy Microarray data analysis.
Servant N, Gravier E, Gestraud P, Laurent C, Paccard C, Biton A, Brito I, Mandel J, Asselain B, Barillot E, Hupé P. Servant N, et al. BMC Res Notes. 2010 Nov 3;3:277. doi: 10.1186/1756-0500-3-277. BMC Res Notes. 2010. PMID: 21047405 Free PMC article.
139 results