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NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment.
Afantitis A, Melagraki G, Isigonis P, Tsoumanis A, Varsou DD, Valsami-Jones E, Papadiamantis A, Ellis LA, Sarimveis H, Doganis P, Karatzas P, Tsiros P, Liampa I, Lobaskin V, Greco D, Serra A, Kinaret PAS, Saarimäki LA, Grafström R, Kohonen P, Nymark P, Willighagen E, Puzyn T, Rybinska-Fryca A, Lyubartsev A, Alstrup Jensen K, Brandenburg JG, Lofts S, Svendsen C, Harrison S, Maier D, Tamm K, Jänes J, Sikk L, Dusinska M, Longhin E, Rundén-Pran E, Mariussen E, El Yamani N, Unger W, Radnik J, Tropsha A, Cohen Y, Leszczynski J, Ogilvie Hendren C, Wiesner M, Winkler D, Suzuki N, Yoon TH, Choi JS, Sanabria N, Gulumian M, Lynch I. Afantitis A, et al. Among authors: serra a. Comput Struct Biotechnol J. 2020 Mar 7;18:583-602. doi: 10.1016/j.csbj.2020.02.023. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32226594 Free PMC article. Review.
INfORM: Inference of NetwOrk Response Modules.
Marwah VS, Kinaret PAS, Serra A, Scala G, Lauerma A, Fortino V, Greco D. Marwah VS, et al. Among authors: serra a. Bioinformatics. 2018 Jun 15;34(12):2136-2138. doi: 10.1093/bioinformatics/bty063. Bioinformatics. 2018. PMID: 29425308 Free PMC article.
eUTOPIA: solUTion for Omics data PreprocessIng and Analysis.
Marwah VS, Scala G, Kinaret PAS, Serra A, Alenius H, Fortino V, Greco D. Marwah VS, et al. Among authors: serra a. Source Code Biol Med. 2019 Jan 29;14:1. doi: 10.1186/s13029-019-0071-7. eCollection 2019. Source Code Biol Med. 2019. PMID: 30728855 Free PMC article.
Transcriptomics in Toxicogenomics, Part III: Data Modelling for Risk Assessment.
Serra A, Fratello M, Cattelani L, Liampa I, Melagraki G, Kohonen P, Nymark P, Federico A, Kinaret PAS, Jagiello K, Ha MK, Choi JS, Sanabria N, Gulumian M, Puzyn T, Yoon TH, Sarimveis H, Grafström R, Afantitis A, Greco D. Serra A, et al. Nanomaterials (Basel). 2020 Apr 8;10(4):708. doi: 10.3390/nano10040708. Nanomaterials (Basel). 2020. PMID: 32276469 Free PMC article. Review.
Transcriptomics in Toxicogenomics, Part I: Experimental Design, Technologies, Publicly Available Data, and Regulatory Aspects.
Kinaret PAS, Serra A, Federico A, Kohonen P, Nymark P, Liampa I, Ha MK, Choi JS, Jagiello K, Sanabria N, Melagraki G, Cattelani L, Fratello M, Sarimveis H, Afantitis A, Yoon TH, Gulumian M, Grafström R, Puzyn T, Greco D. Kinaret PAS, et al. Among authors: serra a. Nanomaterials (Basel). 2020 Apr 15;10(4):750. doi: 10.3390/nano10040750. Nanomaterials (Basel). 2020. PMID: 32326418 Free PMC article. Review.
Transcriptomics in Toxicogenomics, Part II: Preprocessing and Differential Expression Analysis for High Quality Data.
Federico A, Serra A, Ha MK, Kohonen P, Choi JS, Liampa I, Nymark P, Sanabria N, Cattelani L, Fratello M, Kinaret PAS, Jagiello K, Puzyn T, Melagraki G, Gulumian M, Afantitis A, Sarimveis H, Yoon TH, Grafström R, Greco D. Federico A, et al. Among authors: serra a. Nanomaterials (Basel). 2020 May 8;10(5):903. doi: 10.3390/nano10050903. Nanomaterials (Basel). 2020. PMID: 32397130 Free PMC article. Review.
1,710 results