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The parallelism motifs of genomic data analysis.
Philos Trans A Math Phys Eng Sci. 2020 Mar 6;378(2166):20190394. doi: 10.1098/rsta.2019.0394. Epub 2020 Jan 20.
Philos Trans A Math Phys Eng Sci. 2020.
PMID: 31955674
Free PMC article.
ADEPT: a domain independent sequence alignment strategy for gpu architectures.
Awan MG, Deslippe J, Buluc A, Selvitopi O, Hofmeyr S, Oliker L, Yelick K.
Awan MG, et al. Among authors: selvitopi o.
BMC Bioinformatics. 2020 Sep 15;21(1):406. doi: 10.1186/s12859-020-03720-1.
BMC Bioinformatics. 2020.
PMID: 32933482
Free PMC article.
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Unraveling the functional dark matter through global metagenomics.
Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E; Novel Metagenome Protein Families Consortium; Iliopoulos I, Konstantinidis K, Tiedje JM, Pett-Ridge J, Baker D, Visel A, Ouzounis CA, Ovchinnikov S, Buluç A, Kyrpides NC.
Pavlopoulos GA, et al. Among authors: selvitopi o.
Nature. 2023 Oct;622(7983):594-602. doi: 10.1038/s41586-023-06583-7. Epub 2023 Oct 11.
Nature. 2023.
PMID: 37821698
Free PMC article.
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