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Epidemiological and Evolutionary Analysis of West Nile Virus Lineage 2 in Italy.
Mencattelli G, Silverj A, Iapaolo F, Ippoliti C, Teodori L, Di Gennaro A, Curini V, Candeloro L, Conte A, Polci A, Morelli D, Perrotta MG, Marini G, Rosà R, Monaco F, Segata N, Rizzoli A, Rota-Stabelli O, Savini G, West Nile Working Group. Mencattelli G, et al. Among authors: segata n. Viruses. 2022 Dec 22;15(1):35. doi: 10.3390/v15010035. Viruses. 2022. PMID: 36680076 Free PMC article.
Whole-genome epidemiology, characterisation, and phylogenetic reconstruction of Staphylococcus aureus strains in a paediatric hospital.
Manara S, Pasolli E, Dolce D, Ravenni N, Campana S, Armanini F, Asnicar F, Mengoni A, Galli L, Montagnani C, Venturini E, Rota-Stabelli O, Grandi G, Taccetti G, Segata N. Manara S, et al. Among authors: segata n. Genome Med. 2018 Nov 13;10(1):82. doi: 10.1186/s13073-018-0593-7. Genome Med. 2018. PMID: 30424799 Free PMC article.
Large scale genome reconstructions illuminate Wolbachia evolution.
Scholz M, Albanese D, Tuohy K, Donati C, Segata N, Rota-Stabelli O. Scholz M, et al. Among authors: segata n. Nat Commun. 2020 Oct 16;11(1):5235. doi: 10.1038/s41467-020-19016-0. Nat Commun. 2020. PMID: 33067437 Free PMC article.
Spatial and temporal dynamics of West Nile virus between Africa and Europe.
Mencattelli G, Ndione MHD, Silverj A, Diagne MM, Curini V, Teodori L, Di Domenico M, Mbaye R, Leone A, Marcacci M, Gaye A, Ndiaye E, Diallo D, Ancora M, Secondini B, Di Lollo V, Mangone I, Bucciacchio A, Polci A, Marini G, Rosà R, Segata N, Fall G, Cammà C, Monaco F, Diallo M, Rota-Stabelli O, Faye O, Rizzoli A, Savini G. Mencattelli G, et al. Among authors: segata n. Nat Commun. 2023 Oct 13;14(1):6440. doi: 10.1038/s41467-023-42185-7. Nat Commun. 2023. PMID: 37833275 Free PMC article.
The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations.
Tett A, Huang KD, Asnicar F, Fehlner-Peach H, Pasolli E, Karcher N, Armanini F, Manghi P, Bonham K, Zolfo M, De Filippis F, Magnabosco C, Bonneau R, Lusingu J, Amuasi J, Reinhard K, Rattei T, Boulund F, Engstrand L, Zink A, Collado MC, Littman DR, Eibach D, Ercolini D, Rota-Stabelli O, Huttenhower C, Maixner F, Segata N. Tett A, et al. Among authors: segata n. Cell Host Microbe. 2019 Nov 13;26(5):666-679.e7. doi: 10.1016/j.chom.2019.08.018. Epub 2019 Oct 10. Cell Host Microbe. 2019. PMID: 31607556 Free PMC article.
Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations.
Karcher N, Pasolli E, Asnicar F, Huang KD, Tett A, Manara S, Armanini F, Bain D, Duncan SH, Louis P, Zolfo M, Manghi P, Valles-Colomer M, Raffaetà R, Rota-Stabelli O, Collado MC, Zeller G, Falush D, Maixner F, Walker AW, Huttenhower C, Segata N. Karcher N, et al. Among authors: segata n. Genome Biol. 2020 Jun 8;21(1):138. doi: 10.1186/s13059-020-02042-y. Genome Biol. 2020. PMID: 32513234 Free PMC article.
Reconstruction of ancient microbial genomes from the human gut.
Wibowo MC, Yang Z, Borry M, Hübner A, Huang KD, Tierney BT, Zimmerman S, Barajas-Olmos F, Contreras-Cubas C, García-Ortiz H, Martínez-Hernández A, Luber JM, Kirstahler P, Blohm T, Smiley FE, Arnold R, Ballal SA, Pamp SJ, Russ J, Maixner F, Rota-Stabelli O, Segata N, Reinhard K, Orozco L, Warinner C, Snow M, LeBlanc S, Kostic AD. Wibowo MC, et al. Among authors: segata n. Nature. 2021 Jun;594(7862):234-239. doi: 10.1038/s41586-021-03532-0. Epub 2021 May 12. Nature. 2021. PMID: 33981035 Free PMC article.
210 results