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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2003 2
2004 4
2005 1
2006 2
2007 1
2011 1
2012 1
2013 1
2014 2
2015 3
2016 4
2017 1
2018 6
2019 7
2020 6
2021 13
2022 7
2023 8
2024 2

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67 results

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Page 1
HIV-associated gut microbial alterations are dependent on host and geographic context.
Rocafort M, Gootenberg DB, Luévano JM Jr, Paer JM, Hayward MR, Bramante JT, Ghebremichael MS, Xu J, Rogers ZH, Munoz AR, Okello S, Kim JH, Sentongo R, Wagubi R, Lankowski A, Maruapula S, Zhao G, Handley SA, Mosepele M, Siedner MJ, Kwon DS. Rocafort M, et al. Among authors: handley sa. Nat Commun. 2024 Feb 5;15(1):1055. doi: 10.1038/s41467-023-44566-4. Nat Commun. 2024. PMID: 38316748 Free PMC article.
Draft genomes of 12 Bifidobacterium isolates from human IBD fecal samples.
Souza CE, Jacobson NE, An MA, Droit L, Vega AA, Rosales M, Mihindukulasuriya KA, Pastrana K, Handley SA, Parkes M, Rimmer J, Wang D, Dinsdale EA, A Edwards R, Segall AM. Souza CE, et al. Among authors: handley sa. Microbiol Resour Announc. 2024 Jan 17;13(1):e0013023. doi: 10.1128/mra.00130-23. Epub 2023 Dec 15. Microbiol Resour Announc. 2024. PMID: 38099679 Free PMC article.
Host interactions of novel Crassvirales species belonging to multiple families infecting bacterial host, Bacteroides cellulosilyticus WH2.
Papudeshi B, Vega AA, Souza C, Giles SK, Mallawaarachchi V, Roach MJ, An M, Jacobson N, McNair K, Fernanda Mora M, Pastrana K, Boling L, Leigh C, Harker C, Plewa WS, Grigson SR, Bouras G, Decewicz P, Luque A, Droit L, Handley SA, Wang D, Segall AM, Dinsdale EA, Edwards RA. Papudeshi B, et al. Among authors: handley sa. Microb Genom. 2023 Sep;9(9):001100. doi: 10.1099/mgen.0.001100. Microb Genom. 2023. PMID: 37665209 Free PMC article.
The Highly Conserved Stem-Loop II Motif Is Dispensable for SARS-CoV-2.
Jiang H, Joshi A, Gan T, Janowski AB, Fujii C, Bricker TL, Darling TL, Harastani HH, Seehra K, Chen H, Tahan S, Jung A, Febles B, Blatter JA, Handley SA, Parikh BA, Wang D, Boon ACM. Jiang H, et al. Among authors: handley sa. J Virol. 2023 Jun 29;97(6):e0063523. doi: 10.1128/jvi.00635-23. Epub 2023 May 18. J Virol. 2023. PMID: 37223945 Free PMC article.
The highly conserved stem-loop II motif is dispensable for SARS-CoV-2.
Jiang H, Joshi A, Gan T, Janowski AB, Fujii C, Bricker TL, Darling TL, Harastani HH, Seehra K, Chen H, Tahan S, Jung A, Febles B, Blatter JA, Handley SA, Parikh BA, Wang D, Boon AC. Jiang H, et al. Among authors: handley sa. bioRxiv [Preprint]. 2023 Mar 16:2023.03.15.532878. doi: 10.1101/2023.03.15.532878. bioRxiv. 2023. PMID: 36993345 Free PMC article. Updated. Preprint.
Host interactions of novel Crassvirales species belonging to multiple families infecting bacterial host, Bacteroides cellulosilyticus WH2.
Papudeshi B, Vega AA, Souza C, Giles SK, Mallawaarachchi V, Roach MJ, An M, Jacobson N, McNair K, Mora MF, Pastrana K, Boling L, Leigh C, Harker C, Plewa WS, Grigson SR, Bouras G, Decewicz P, Luque A, Droit L, Handley SA, Wang D, Segall AM, Dinsdale EA, Edwards RA. Papudeshi B, et al. Among authors: handley sa. bioRxiv [Preprint]. 2023 Jul 26:2023.03.05.531146. doi: 10.1101/2023.03.05.531146. bioRxiv. 2023. PMID: 36945541 Free PMC article. Updated. Preprint.
The history and organization of the Workshop on Population and Speciation Genomics.
Barth JMI, Handley SA, Kintzl D, Leonard G, Malinsky M, Matschiner M, Meyer BS, Salzburger W, Stefka J, Trucchi E. Barth JMI, et al. Among authors: handley sa. Evolution (N Y). 2023;16(1):2. doi: 10.1186/s12052-023-00182-w. Epub 2023 Feb 10. Evolution (N Y). 2023. PMID: 36789285 Free PMC article.
ApoE isoform- and microbiota-dependent progression of neurodegeneration in a mouse model of tauopathy.
Seo DO, O'Donnell D, Jain N, Ulrich JD, Herz J, Li Y, Lemieux M, Cheng J, Hu H, Serrano JR, Bao X, Franke E, Karlsson M, Meier M, Deng S, Desai C, Dodiya H, Lelwala-Guruge J, Handley SA, Kipnis J, Sisodia SS, Gordon JI, Holtzman DM. Seo DO, et al. Among authors: handley sa. Science. 2023 Jan 13;379(6628):eadd1236. doi: 10.1126/science.add1236. Epub 2023 Jan 13. Science. 2023. PMID: 36634180 Free PMC article.
Ten simple rules and a template for creating workflows-as-applications.
Roach MJ, Pierce-Ward NT, Suchecki R, Mallawaarachchi V, Papudeshi B, Handley SA, Brown CT, Watson-Haigh NS, Edwards RA. Roach MJ, et al. Among authors: handley sa. PLoS Comput Biol. 2022 Dec 15;18(12):e1010705. doi: 10.1371/journal.pcbi.1010705. eCollection 2022 Dec. PLoS Comput Biol. 2022. PMID: 36520686 Free PMC article. No abstract available.
67 results