Schulz MH - Search Results

1

Mapping translocation breakpoints by next-generation sequencing.

Chen W, Kalscheuer V, Tzschach A, Menzel C, Ullmann R, Schulz MH, Erdogan F, Li N, Kijas Z, Arkesteijn G, Pajares IL, Goetz-Sothmann M, Heinrich U, Rost I, Dufke A, Grasshoff U, Glaeser B, Vingron M, Ropers HH. Chen W, et al. Among authors: schulz mh. Genome Res. 2008 Jul;18(7):1143-9. doi: 10.1101/gr.076166.108. Epub 2008 Mar 7. Genome Res. 2008. PMID: 18326688 Free PMC article.

2

A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome.

Sultan M, Schulz MH, Richard H, Magen A, Klingenhoff A, Scherf M, Seifert M, Borodina T, Soldatov A, Parkhomchuk D, Schmidt D, O'Keeffe S, Haas S, Vingron M, Lehrach H, Yaspo ML. Sultan M, et al. Among authors: schulz mh. Science. 2008 Aug 15;321(5891):956-60. doi: 10.1126/science.1160342. Epub 2008 Jul 3. Science. 2008. PMID: 18599741

3

Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments.

Richard H, Schulz MH, Sultan M, Nürnberger A, Schrinner S, Balzereit D, Dagand E, Rasche A, Lehrach H, Vingron M, Haas SA, Yaspo ML. Richard H, et al. Among authors: schulz mh. Nucleic Acids Res. 2010 Jun;38(10):e112. doi: 10.1093/nar/gkq041. Epub 2010 Feb 11. Nucleic Acids Res. 2010. PMID: 20150413 Free PMC article.

4

A tandem sequence motif acts as a distance-dependent enhancer in a set of genes involved in translation by binding the proteins NonO and SFPQ.

Roepcke S, Stahlberg S, Klein H, Schulz MH, Theobald L, Gohlke S, Vingron M, Walther DJ. Roepcke S, et al. Among authors: schulz mh. BMC Genomics. 2011 Dec 20;12:624. doi: 10.1186/1471-2164-12-624. BMC Genomics. 2011. PMID: 22185324 Free PMC article.

5

Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS.

Emde AK, Schulz MH, Weese D, Sun R, Vingron M, Kalscheuer VM, Haas SA, Reinert K. Emde AK, et al. Among authors: schulz mh. Bioinformatics. 2012 Mar 1;28(5):619-27. doi: 10.1093/bioinformatics/bts019. Epub 2012 Jan 11. Bioinformatics. 2012. PMID: 22238266

6

Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts.

Göke J, Schulz MH, Lasserre J, Vingron M. Göke J, et al. Among authors: schulz mh. Bioinformatics. 2012 Mar 1;28(5):656-63. doi: 10.1093/bioinformatics/bts028. Epub 2012 Jan 12. Bioinformatics. 2012. PMID: 22247280 Free PMC article.

7

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels.

Schulz MH, Zerbino DR, Vingron M, Birney E. Schulz MH, et al. Bioinformatics. 2012 Apr 15;28(8):1086-92. doi: 10.1093/bioinformatics/bts094. Epub 2012 Feb 24. Bioinformatics. 2012. PMID: 22368243 Free PMC article.

8

De novo ChIP-seq analysis.

He X, Cicek AE, Wang Y, Schulz MH, Le HS, Bar-Joseph Z. He X, et al. Among authors: schulz mh. Genome Biol. 2015 Sep 23;16(1):205. doi: 10.1186/s13059-015-0756-4. Genome Biol. 2015. PMID: 26400819 Free PMC article.

9

Identification of transcription factor binding sites using ATAC-seq.

Li Z, Schulz MH, Look T, Begemann M, Zenke M, Costa IG. Li Z, et al. Among authors: schulz mh. Genome Biol. 2019 Feb 26;20(1):45. doi: 10.1186/s13059-019-1642-2. Genome Biol. 2019. PMID: 30808370 Free PMC article.

10

Broad domains of histone marks in the highly compact Paramecium macronuclear genome.

Drews F, Salhab A, Karunanithi S, Cheaib M, Jung M, Schulz MH, Simon M. Drews F, et al. Among authors: schulz mh. Genome Res. 2022 Apr;32(4):710-725. doi: 10.1101/gr.276126.121. Epub 2022 Mar 9. Genome Res. 2022. PMID: 35264449 Free PMC article.

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