Schroeder SJ - Search Results

1

Perspectives on Viral RNA Genomes and the RNA Folding Problem.

Schroeder SJ. Schroeder SJ. Viruses. 2020 Oct 5;12(10):1126. doi: 10.3390/v12101126. Viruses. 2020. PMID: 33027988 Free PMC article. Review.

2

Advances in RNA structure prediction from sequence: new tools for generating hypotheses about viral RNA structure-function relationships.

Schroeder SJ. Schroeder SJ. J Virol. 2009 Jul;83(13):6326-34. doi: 10.1128/JVI.00251-09. Epub 2009 Apr 15. J Virol. 2009. PMID: 19369331 Free PMC article. Review. No abstract available.

3

Different sequences show similar quaternary interaction stabilities in prohead viral RNA self-assembly.

Gu X, Schroeder SJ. Gu X, et al. Among authors: schroeder sj. J Biol Chem. 2011 Apr 22;286(16):14419-26. doi: 10.1074/jbc.M110.191064. Epub 2011 Feb 24. J Biol Chem. 2011. PMID: 21349846 Free PMC article.

4

Ensemble of secondary structures for encapsidated satellite tobacco mosaic virus RNA consistent with chemical probing and crystallography constraints.

Schroeder SJ, Stone JW, Bleckley S, Gibbons T, Mathews DM. Schroeder SJ, et al. Biophys J. 2011 Jul 6;101(1):167-75. doi: 10.1016/j.bpj.2011.05.053. Biophys J. 2011. PMID: 21723827 Free PMC article.

5

Incorporating global features of RNA motifs in predictions for an ensemble of secondary structures for encapsidated MS2 bacteriophage RNA.

Bleckley S, Schroeder SJ. Bleckley S, et al. Among authors: schroeder sj. RNA. 2012 Jul;18(7):1309-18. doi: 10.1261/rna.032326.112. Epub 2012 May 29. RNA. 2012. PMID: 22645379 Free PMC article.

6

Crumple: a method for complete enumeration of all possible pseudoknot-free RNA secondary structures.

Bleckley S, Stone JW, Schroeder SJ. Bleckley S, et al. Among authors: schroeder sj. PLoS One. 2012;7(12):e52414. doi: 10.1371/journal.pone.0052414. Epub 2012 Dec 27. PLoS One. 2012. PMID: 23300665 Free PMC article.

7

Probing viral genomic structure: alternative viewpoints and alternative structures for satellite tobacco mosaic virus RNA.

Schroeder SJ. Schroeder SJ. Biochemistry. 2014 Nov 4;53(43):6728-37. doi: 10.1021/bi501051k. Epub 2014 Oct 24. Biochemistry. 2014. PMID: 25320869 Review.

8

A parallel implementation of the Wuchty algorithm with additional experimental filters to more thoroughly explore RNA conformational space.

Stone JW, Bleckley S, Lavelle S, Schroeder SJ. Stone JW, et al. Among authors: schroeder sj. PLoS One. 2015 Feb 19;10(2):e0117217. doi: 10.1371/journal.pone.0117217. eCollection 2015. PLoS One. 2015. PMID: 25695434 Free PMC article.

9

Prohead RNA: a noncoding viral RNA of novel structure and function.

Hill AC, Bartley LE, Schroeder SJ. Hill AC, et al. Among authors: schroeder sj. Wiley Interdiscip Rev RNA. 2016 Jul;7(4):428-37. doi: 10.1002/wrna.1330. Epub 2016 Jan 25. Wiley Interdiscip Rev RNA. 2016. PMID: 26810250 Free PMC article. Review.

10

NMR Structures and Dynamics in a Prohead RNA Loop that Binds Metal Ions.

Gu X, Park SY, Tonelli M, Cornilescu G, Xia T, Zhong D, Schroeder SJ. Gu X, et al. Among authors: schroeder sj. J Phys Chem Lett. 2016 Oct 6;7(19):3841-3846. doi: 10.1021/acs.jpclett.6b01465. Epub 2016 Sep 19. J Phys Chem Lett. 2016. PMID: 27631837 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

45 results

Search Page