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Dynamic genome evolution in a model fern.
Nat Plants. 2022 Sep;8(9):1038-1051. doi: 10.1038/s41477-022-01226-7. Epub 2022 Sep 1.
Nat Plants. 2022.
PMID: 36050461
Free PMC article.
Nostoc Talks Back: Temporal Patterns of Differential Gene Expression During Establishment of Anthoceros-Nostoc Symbiosis.
Chatterjee P, Schafran P, Li FW, Meeks JC.
Chatterjee P, et al. Among authors: schafran p.
Mol Plant Microbe Interact. 2022 Oct;35(10):917-932. doi: 10.1094/MPMI-05-22-0101-R. Epub 2022 Sep 29.
Mol Plant Microbe Interact. 2022.
PMID: 35802132
Free article.
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PURC Provides Improved Sequence Inference for Polyploid Phylogenetics and Other Manifestations of the Multiple-Copy Problem.
Schafran P, Li FW, Rothfels CJ.
Schafran P, et al.
Methods Mol Biol. 2023;2545:189-206. doi: 10.1007/978-1-0716-2561-3_10.
Methods Mol Biol. 2023.
PMID: 36720814
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The ancestral chromatin landscape of land plants.
Hisanaga T, Wu S, Schafran P, Axelsson E, Akimcheva S, Dolan L, Li FW, Berger F.
Hisanaga T, et al. Among authors: schafran p.
New Phytol. 2023 Dec;240(5):2085-2101. doi: 10.1111/nph.19311. Epub 2023 Oct 12.
New Phytol. 2023.
PMID: 37823324
Free PMC article.
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Homoploid hybrids, allopolyploids, and high ploidy levels characterize the evolutionary history of a western North American quillwort (Isoëtes) complex.
Suissa JS, Kinosian SP, Schafran PW, Bolin JF, Taylor WC, Zimmer EA.
Suissa JS, et al. Among authors: schafran pw.
Mol Phylogenet Evol. 2022 Jan;166:107332. doi: 10.1016/j.ympev.2021.107332. Epub 2021 Oct 20.
Mol Phylogenet Evol. 2022.
PMID: 34687842
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Isoetes mississippiensis: A new quillwort from Mississippi, USA.
Schafran PW, Leonard SW, Bray RD, Taylor WC, Musselman LJ.
Schafran PW, et al.
PhytoKeys. 2016 Nov 8;(74):97-106. doi: 10.3897/phytokeys.74.10380. eCollection 2016.
PhytoKeys. 2016.
PMID: 28127238
Free PMC article.
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Low-copy nuclear markers in Isoëtes (Isoëtaceae) identified with transcriptomes.
Schafran PW, Johnson G, Taylor WC, Zimmer EA, Musselman LJ.
Schafran PW, et al.
Appl Plant Sci. 2018 May 8;6(4):e1142. doi: 10.1002/aps3.1142. eCollection 2018 Apr.
Appl Plant Sci. 2018.
PMID: 30131884
Free PMC article.
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