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Repeat- and error-aware comparison of deletions.
Wittler R, Marschall T, Schönhuth A, Mäkinen V. Wittler R, et al. Among authors: schonhuth a. Bioinformatics. 2015 Sep 15;31(18):2947-54. doi: 10.1093/bioinformatics/btv304. Epub 2015 May 15. Bioinformatics. 2015. PMID: 25979471
OGRE: Overlap Graph-based metagenomic Read clustEring.
Balvert M, Luo X, Hauptfeld E, Schönhuth A, Dutilh BE. Balvert M, et al. Among authors: schonhuth a. Bioinformatics. 2021 May 17;37(7):905-912. doi: 10.1093/bioinformatics/btaa760. Bioinformatics. 2021. PMID: 32871010 Free PMC article.
Enhancing Long-Read-Based Strain-Aware Metagenome Assembly.
Luo X, Kang X, Schönhuth A. Luo X, et al. Among authors: schonhuth a. Front Genet. 2022 May 13;13:868280. doi: 10.3389/fgene.2022.868280. eCollection 2022. Front Genet. 2022. PMID: 35646097 Free PMC article.
Snowball: strain aware gene assembly of metagenomes.
Gregor I, Schönhuth A, McHardy AC. Gregor I, et al. Among authors: schonhuth a. Bioinformatics. 2016 Sep 1;32(17):i649-i657. doi: 10.1093/bioinformatics/btw426. Bioinformatics. 2016. PMID: 27587685
57 results