Satou K - Search Results

1

PAAQD: Predicting immunogenicity of MHC class I binding peptides using amino acid pairwise contact potentials and quantum topological molecular similarity descriptors.

Saethang T, Hirose O, Kimkong I, Tran VA, Dang XT, Nguyen LA, Le TK, Kubo M, Yamada Y, Satou K. Saethang T, et al. Among authors: satou k. J Immunol Methods. 2013 Jan 31;387(1-2):293-302. doi: 10.1016/j.jim.2012.09.016. Epub 2012 Oct 9. J Immunol Methods. 2013. PMID: 23058674

2

EpicCapo: epitope prediction using combined information of amino acid pairwise contact potentials and HLA-peptide contact site information.

Saethang T, Hirose O, Kimkong I, Tran VA, Dang XT, Nguyen LA, Le TK, Kubo M, Yamada Y, Satou K. Saethang T, et al. Among authors: satou k. BMC Bioinformatics. 2012 Nov 24;13:313. doi: 10.1186/1471-2105-13-313. BMC Bioinformatics. 2012. PMID: 23176036 Free PMC article.

3

Factors to preserve CpG-rich sequences in methylated CpG islands.

Miyahara H, Hirose O, Satou K, Yamada Y. Miyahara H, et al. Among authors: satou k. BMC Genomics. 2015 Feb 28;16(1):144. doi: 10.1186/s12864-015-1286-x. BMC Genomics. 2015. PMID: 25879481 Free PMC article.

4

Validation of MIMGO: a method to identify differentially expressed GO terms in a microarray dataset.

Yamada Y, Sawada H, Hirotani K, Oshima M, Satou K. Yamada Y, et al. Among authors: satou k. BMC Res Notes. 2012 Dec 12;5:680. doi: 10.1186/1756-0500-5-680. BMC Res Notes. 2012. PMID: 23232071 Free PMC article.

5

Inflammation-induced repression of tumor suppressor miR-7 in gastric tumor cells.

Kong D, Piao YS, Yamashita S, Oshima H, Oguma K, Fushida S, Fujimura T, Minamoto T, Seno H, Yamada Y, Satou K, Ushijima T, Ishikawa TO, Oshima M. Kong D, et al. Among authors: satou k. Oncogene. 2012 Aug 30;31(35):3949-60. doi: 10.1038/onc.2011.558. Epub 2011 Dec 5. Oncogene. 2012. PMID: 22139078

6

Characterization of a broadly reactive monoclonal antibody against norovirus genogroups I and II: recognition of a novel conformational epitope.

Shiota T, Okame M, Takanashi S, Khamrin P, Takagi M, Satou K, Masuoka Y, Yagyu F, Shimizu Y, Kohno H, Mizuguchi M, Okitsu S, Ushijima H. Shiota T, et al. Among authors: satou k. J Virol. 2007 Nov;81(22):12298-306. doi: 10.1128/JVI.00891-07. Epub 2007 Sep 12. J Virol. 2007. PMID: 17855545 Free PMC article.

7

Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.

Takahashi H, Hayashi N, Hiragori Y, Sasaki S, Motomura T, Yamashita Y, Naito S, Takahashi A, Fuse K, Satou K, Endo T, Kojima S, Onouchi H. Takahashi H, et al. Among authors: satou k. BMC Genomics. 2020 Mar 30;21(1):260. doi: 10.1186/s12864-020-6662-5. BMC Genomics. 2020. PMID: 32228449 Free PMC article.

8

Support vector machines for prediction and analysis of beta and gamma-turns in proteins.

Pham TH, Satou K, Ho TB. Pham TH, et al. Among authors: satou k. J Bioinform Comput Biol. 2005 Apr;3(2):343-58. doi: 10.1142/s0219720005001089. J Bioinform Comput Biol. 2005. PMID: 15852509

9

Detection and normalization of biases present in spotted cDNA microarray data: a composite method addressing dye, intensity-dependent, spatially-dependent, and print-order biases.

Uchida S, Nishida Y, Satou K, Muta S, Tashiro K, Kuhara S. Uchida S, et al. Among authors: satou k. DNA Res. 2005 Feb 28;12(1):1-7. doi: 10.1093/dnares/12.1.1. DNA Res. 2005. PMID: 16106748 Free article.

10

Finding microRNA regulatory modules in human genome using rule induction.

Tran DH, Satou K, Ho TB. Tran DH, et al. Among authors: satou k. BMC Bioinformatics. 2008 Dec 12;9 Suppl 12(Suppl 12):S5. doi: 10.1186/1471-2105-9-S12-S5. BMC Bioinformatics. 2008. PMID: 19091028 Free PMC article.

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