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Year Number of Results
2014 2
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2016 2
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2018 1
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2023 7
2024 5

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Page 1
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes.
Gand M, Navickaite I, Bartsch LJ, Grützke J, Overballe-Petersen S, Rasmussen A, Otani S, Michelacci V, Matamoros BR, González-Zorn B, Brouwer MSM, Di Marcantonio L, Bloemen B, Vanneste K, Roosens NHCJ, AbuOun M, De Keersmaecker SCJ. Gand M, et al. Among authors: otani s. Front Microbiol. 2024 Apr 4;15:1336532. doi: 10.3389/fmicb.2024.1336532. eCollection 2024. Front Microbiol. 2024. PMID: 38659981 Free PMC article.
Ongoing mpox outbreak in Kamituga, South Kivu province, associated with monkeypox virus of a novel Clade I sub-lineage, Democratic Republic of the Congo, 2024.
Masirika LM, Udahemuka JC, Schuele L, Ndishimye P, Otani S, Mbiribindi JB, Marekani JM, Mambo LM, Bubala NM, Boter M, Nieuwenhuijse DF, Lang T, Kalalizi EB, Musabyimana JP, Aarestrup FM, Koopmans M, Oude Munnink BB, Siangoli FB. Masirika LM, et al. Among authors: otani s. Euro Surveill. 2024 Mar;29(11):2400106. doi: 10.2807/1560-7917.ES.2024.29.11.2400106. Euro Surveill. 2024. PMID: 38487886 Free PMC article.
A novel metagenomic approach uncovers phage genes as markers for increased disinfectant tolerance in mixed Listeria monocytogenes communities.
Karlsmose AK, Ivanova M, Kragh ML, Kjeldgaard JS, Otani S, Svendsen CA, Papić B, Zdovc I, Tasara T, Stephan R, Heir E, Langsrud S, Møretrø T, Dalgaard P, Fagerlund A, Hansen LT, Aarestrup FM, Leekitcharoenphon P. Karlsmose AK, et al. Among authors: otani s. Infect Genet Evol. 2024 Apr;119:105582. doi: 10.1016/j.meegid.2024.105582. Epub 2024 Mar 11. Infect Genet Evol. 2024. PMID: 38467173 Free article.
The first complete genome sequence of Staphylococcus aureus ST5477.
Leekitcharoenphon P, Otani S, Szarvas J, Mzee T, Kumburu H, Møller FD, Aarestrup FM. Leekitcharoenphon P, et al. Among authors: otani s. Microbiol Resour Announc. 2024 Feb 15;13(2):e0100423. doi: 10.1128/mra.01004-23. Epub 2024 Jan 5. Microbiol Resour Announc. 2024. PMID: 38179915 Free PMC article.
The resistomes of rural and urban pigs and poultry in Ghana.
Jensen EEB, Sedor V, Eshun E, Njage P, Otani S, Aarestrup FM. Jensen EEB, et al. Among authors: otani s. mSystems. 2023 Oct 26;8(5):e0062923. doi: 10.1128/msystems.00629-23. Epub 2023 Sep 22. mSystems. 2023. PMID: 37737585 Free PMC article.
Host innate immune responses and microbiome profile of neonatal calves challenged with Cryptosporidium parvum and the effect of bovine colostrum supplementation.
Gamsjäger L, Cirone KM, Schluessel S, Campsall M, Herik A, Lahiri P, Young D, Dufour A, Sapountzis P, Otani S, Gomez DE, Windeyer MC, Cobo ER. Gamsjäger L, et al. Among authors: otani s. Front Cell Infect Microbiol. 2023 May 3;13:1165312. doi: 10.3389/fcimb.2023.1165312. eCollection 2023. Front Cell Infect Microbiol. 2023. PMID: 37207189 Free PMC article.
26 results