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Cell-specific regulation of gene expression using splicing-dependent frameshifting.
Ling JP, Bygrave AM, Santiago CP, Carmen-Orozco RP, Trinh VT, Yu M, Li Y, Liu Y, Bowden KD, Duncan LH, Han J, Taneja K, Dongmo R, Babola TA, Parker P, Jiang L, Leavey PJ, Smith JJ, Vistein R, Gimmen MY, Dubner B, Helmenstine E, Teodorescu P, Karantanos T, Ghiaur G, Kanold PO, Bergles D, Langmead B, Sun S, Nielsen KJ, Peachey N, Singh MS, Dalton WB, Rajaii F, Huganir RL, Blackshaw S. Ling JP, et al. Among authors: santiago cp. Nat Commun. 2022 Oct 1;13(1):5773. doi: 10.1038/s41467-022-33523-2. Nat Commun. 2022. PMID: 36182931 Free PMC article.
Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Clark BS, Stein-O'Brien GL, Shiau F, Cannon GH, Davis-Marcisak E, Sherman T, Santiago CP, Hoang TV, Rajaii F, James-Esposito RE, Gronostajski RM, Fertig EJ, Goff LA, Blackshaw S. Clark BS, et al. Among authors: santiago cp. Neuron. 2019 Jun 19;102(6):1111-1126.e5. doi: 10.1016/j.neuron.2019.04.010. Epub 2019 May 22. Neuron. 2019. PMID: 31128945 Free PMC article.
ASCOT identifies key regulators of neuronal subtype-specific splicing.
Ling JP, Wilks C, Charles R, Leavey PJ, Ghosh D, Jiang L, Santiago CP, Pang B, Venkataraman A, Clark BS, Nellore A, Langmead B, Blackshaw S. Ling JP, et al. Among authors: santiago cp. Nat Commun. 2020 Jan 9;11(1):137. doi: 10.1038/s41467-019-14020-5. Nat Commun. 2020. PMID: 31919425 Free PMC article.
Gene regulatory networks controlling vertebrate retinal regeneration.
Hoang T, Wang J, Boyd P, Wang F, Santiago C, Jiang L, Yoo S, Lahne M, Todd LJ, Jia M, Saez C, Keuthan C, Palazzo I, Squires N, Campbell WA, Rajaii F, Parayil T, Trinh V, Kim DW, Wang G, Campbell LJ, Ash J, Fischer AJ, Hyde DR, Qian J, Blackshaw S. Hoang T, et al. Science. 2020 Nov 20;370(6519):eabb8598. doi: 10.1126/science.abb8598. Epub 2020 Oct 1. Science. 2020. PMID: 33004674 Free PMC article.
Single-cell transcriptome analysis of xenotransplanted human retinal organoids defines two migratory cell populations of nonretinal origin.
Liu YV, Santiago CP, Sogunro A, Konar GJ, Hu MW, McNally MM, Lu YC, Flores-Bellver M, Aparicio-Domingo S, Li KV, Li ZL, Agakishiev D, Hadyniak SE, Hussey KA, Creamer TJ, Orzolek LD, Teng D, Canto-Soler MV, Qian J, Jiang Z, Johnston RJ Jr, Blackshaw S, Singh MS. Liu YV, et al. Among authors: santiago cp. Stem Cell Reports. 2023 May 9;18(5):1138-1154. doi: 10.1016/j.stemcr.2023.04.004. Stem Cell Reports. 2023. PMID: 37163980 Free PMC article.
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