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The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars.
Salojärvi J, Rambani A, Yu Z, Guyot R, Strickler S, Lepelley M, Wang C, Rajaraman S, Rastas P, Zheng C, Muñoz DS, Meidanis J, Paschoal AR, Bawin Y, Krabbenhoft TJ, Wang ZQ, Fleck SJ, Aussel R, Bellanger L, Charpagne A, Fournier C, Kassam M, Lefebvre G, Métairon S, Moine D, Rigoreau M, Stolte J, Hamon P, Couturon E, Tranchant-Dubreuil C, Mukherjee M, Lan T, Engelhardt J, Stadler P, Correia De Lemos SM, Suzuki SI, Sumirat U, Wai CM, Dauchot N, Orozco-Arias S, Garavito A, Kiwuka C, Musoli P, Nalukenge A, Guichoux E, Reinout H, Smit M, Carretero-Paulet L, Filho OG, Braghini MT, Padilha L, Sera GH, Ruttink T, Henry R, Marraccini P, Van de Peer Y, Andrade A, Domingues D, Giuliano G, Mueller L, Pereira LF, Plaisance S, Poncet V, Rombauts S, Sankoff D, Albert VA, Crouzillat D, de Kochko A, Descombes P. Salojärvi J, et al. Among authors: sankoff d. Nat Genet. 2024 Apr;56(4):721-731. doi: 10.1038/s41588-024-01695-w. Epub 2024 Apr 15. Nat Genet. 2024. PMID: 38622339 Free PMC article.
Buxus and Tetracentron genomes help resolve eudicot genome history.
Chanderbali AS, Jin L, Xu Q, Zhang Y, Zhang J, Jian S, Carroll E, Sankoff D, Albert VA, Howarth DG, Soltis DE, Soltis PS. Chanderbali AS, et al. Among authors: sankoff d. Nat Commun. 2022 Feb 2;13(1):643. doi: 10.1038/s41467-022-28312-w. Nat Commun. 2022. PMID: 35110570 Free PMC article.
Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars.
Hu G, Feng J, Xiang X, Wang J, Salojärvi J, Liu C, Wu Z, Zhang J, Liang X, Jiang Z, Liu W, Ou L, Li J, Fan G, Mai Y, Chen C, Zhang X, Zheng J, Zhang Y, Peng H, Yao L, Wai CM, Luo X, Fu J, Tang H, Lan T, Lai B, Sun J, Wei Y, Li H, Chen J, Huang X, Yan Q, Liu X, McHale LK, Rolling W, Guyot R, Sankoff D, Zheng C, Albert VA, Ming R, Chen H, Xia R, Li J. Hu G, et al. Among authors: sankoff d. Nat Genet. 2022 Jan;54(1):73-83. doi: 10.1038/s41588-021-00971-3. Epub 2022 Jan 3. Nat Genet. 2022. PMID: 34980919 Free PMC article.
155 results