Sammeth M - Search Results

1

Landscape of the spliced leader trans-splicing mechanism in Schistosoma mansoni.

Boroni M, Sammeth M, Gava SG, Jorge NAN, Macedo AM, Machado CR, Mourão MM, Franco GR. Boroni M, et al. Among authors: sammeth m. Sci Rep. 2018 Mar 1;8(1):3877. doi: 10.1038/s41598-018-22093-3. Sci Rep. 2018. PMID: 29497070 Free PMC article.

2

Sequence variation between 462 human individuals fine-tunes functional sites of RNA processing.

Ferreira PG, Oti M, Barann M, Wieland T, Ezquina S, Friedländer MR, Rivas MA, Esteve-Codina A; GEUVADIS Consortium; Rosenstiel P, Strom TM, Lappalainen T, Guigó R, Sammeth M. Ferreira PG, et al. Among authors: sammeth m. Sci Rep. 2016 Sep 12;6:32406. doi: 10.1038/srep32406. Sci Rep. 2016. PMID: 27617755 Free PMC article.

3

Analysis of ovarian transcriptomes reveals thousands of novel genes in the insect vector Rhodnius prolixus.

Coelho VL, de Brito TF, de Abreu Brito IA, Cardoso MA, Berni MA, Araujo HMM, Sammeth M, Pane A. Coelho VL, et al. Among authors: sammeth m. Sci Rep. 2021 Jan 21;11(1):1918. doi: 10.1038/s41598-021-81387-1. Sci Rep. 2021. PMID: 33479356 Free PMC article.

4

An automated method for detecting alternatively spliced protein domains.

Coelho V, Sammeth M. Coelho V, et al. Among authors: sammeth m. Bioinformatics. 2018 Nov 15;34(22):3809-3816. doi: 10.1093/bioinformatics/bty425. Bioinformatics. 2018. PMID: 29868795

5

Characterization of HPV integration, viral gene expression and E6E7 alternative transcripts by RNA-Seq: A descriptive study in invasive cervical cancer.

Brant AC, Menezes AN, Felix SP, de Almeida LM, Sammeth M, Moreira MAM. Brant AC, et al. Among authors: sammeth m. Genomics. 2019 Dec;111(6):1853-1861. doi: 10.1016/j.ygeno.2018.12.008. Epub 2018 Dec 13. Genomics. 2019. PMID: 30552977 Free article.

6

Tandem RNA chimeras contribute to transcriptome diversity in human population and are associated with intronic genetic variants.

Greger L, Su J, Rung J, Ferreira PG; Geuvadis consortium; Lappalainen T, Dermitzakis ET, Brazma A. Greger L, et al. PLoS One. 2014 Aug 18;9(8):e104567. doi: 10.1371/journal.pone.0104567. eCollection 2014. PLoS One. 2014. PMID: 25133550 Free PMC article.

7

Nova1 is a master regulator of alternative splicing in pancreatic beta cells.

Villate O, Turatsinze JV, Mascali LG, Grieco FA, Nogueira TC, Cunha DA, Nardelli TR, Sammeth M, Salunkhe VA, Esguerra JL, Eliasson L, Marselli L, Marchetti P, Eizirik DL. Villate O, et al. Among authors: sammeth m. Nucleic Acids Res. 2014 Oct;42(18):11818-30. doi: 10.1093/nar/gku861. Epub 2014 Sep 23. Nucleic Acids Res. 2014. PMID: 25249621 Free PMC article.

8

Complete alternative splicing events are bubbles in splicing graphs.

Sammeth M. Sammeth M. J Comput Biol. 2009 Aug;16(8):1117-40. doi: 10.1089/cmb.2009.0108. J Comput Biol. 2009. PMID: 19689216 Free article.

9

A general definition and nomenclature for alternative splicing events.

Sammeth M, Foissac S, Guigó R. Sammeth M, et al. PLoS Comput Biol. 2008 Aug 8;4(8):e1000147. doi: 10.1371/journal.pcbi.1000147. PLoS Comput Biol. 2008. PMID: 18688268 Free PMC article.

10

Estimation of alternative splicing variability in human populations.

Gonzàlez-Porta M, Calvo M, Sammeth M, Guigó R. Gonzàlez-Porta M, et al. Among authors: sammeth m. Genome Res. 2012 Mar;22(3):528-38. doi: 10.1101/gr.121947.111. Epub 2011 Nov 23. Genome Res. 2012. PMID: 22113879 Free PMC article.

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