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Pneumococcal within-host diversity during colonization, transmission and treatment.
Tonkin-Hill G, Ling C, Chaguza C, Salter SJ, Hinfonthong P, Nikolaou E, Tate N, Pastusiak A, Turner C, Chewapreecha C, Frost SDW, Corander J, Croucher NJ, Turner P, Bentley SD. Tonkin-Hill G, et al. Among authors: salter sj. Nat Microbiol. 2022 Nov;7(11):1791-1804. doi: 10.1038/s41564-022-01238-1. Epub 2022 Oct 10. Nat Microbiol. 2022. PMID: 36216891 Free PMC article.
Dominant role of nucleotide substitution in the diversification of serotype 3 pneumococci over decades and during a single infection.
Croucher NJ, Mitchell AM, Gould KA, Inverarity D, Barquist L, Feltwell T, Fookes MC, Harris SR, Dordel J, Salter SJ, Browall S, Zemlickova H, Parkhill J, Normark S, Henriques-Normark B, Hinds J, Mitchell TJ, Bentley SD. Croucher NJ, et al. Among authors: salter sj. PLoS Genet. 2013;9(10):e1003868. doi: 10.1371/journal.pgen.1003868. Epub 2013 Oct 10. PLoS Genet. 2013. PMID: 24130509 Free PMC article.
Dense genomic sampling identifies highways of pneumococcal recombination.
Chewapreecha C, Harris SR, Croucher NJ, Turner C, Marttinen P, Cheng L, Pessia A, Aanensen DM, Mather AE, Page AJ, Salter SJ, Harris D, Nosten F, Goldblatt D, Corander J, Parkhill J, Turner P, Bentley SD. Chewapreecha C, et al. Among authors: salter sj. Nat Genet. 2014 Mar;46(3):305-309. doi: 10.1038/ng.2895. Epub 2014 Feb 9. Nat Genet. 2014. PMID: 24509479 Free PMC article.
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes.
Chewapreecha C, Marttinen P, Croucher NJ, Salter SJ, Harris SR, Mather AE, Hanage WP, Goldblatt D, Nosten FH, Turner C, Turner P, Bentley SD, Parkhill J. Chewapreecha C, et al. Among authors: salter sj. PLoS Genet. 2014 Aug 7;10(8):e1004547. doi: 10.1371/journal.pgen.1004547. eCollection 2014 Aug. PLoS Genet. 2014. PMID: 25101644 Free PMC article.
Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.
Hilty M, Wüthrich D, Salter SJ, Engel H, Campbell S, Sá-Leão R, de Lencastre H, Hermans P, Sadowy E, Turner P, Chewapreecha C, Diggle M, Pluschke G, McGee L, Eser ÖK, Low DE, Smith-Vaughan H, Endimiani A, Küffer M, Dupasquier M, Beaudoing E, Weber J, Bruggmann R, Hanage WP, Parkhill J, Hathaway LJ, Mühlemann K, Bentley SD. Hilty M, et al. Among authors: salter sj. Genome Biol Evol. 2014 Dec 4;6(12):3281-94. doi: 10.1093/gbe/evu263. Genome Biol Evol. 2014. PMID: 25480686 Free PMC article.
The industrial evolution.
Salter SJ. Salter SJ. Nat Rev Microbiol. 2012 Dec;10(12):806. doi: 10.1038/nrmicro2915. Epub 2012 Nov 13. Nat Rev Microbiol. 2012. PMID: 23147705
33 results