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Diagnostics and correction of batch effects in large-scale proteomic studies: a tutorial.
Čuklina J, Lee CH, Williams EG, Sajic T, Collins BC, Rodríguez Martínez M, Sharma VS, Wendt F, Goetze S, Keele GR, Wollscheid B, Aebersold R, Pedrioli PGA. Čuklina J, et al. Among authors: sajic t. Mol Syst Biol. 2021 Aug;17(8):e10240. doi: 10.15252/msb.202110240. Mol Syst Biol. 2021. PMID: 34432947 Free PMC article. Review.
Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry.
Caron E, Roncagalli R, Hase T, Wolski WE, Choi M, Menoita MG, Durand S, García-Blesa A, Fierro-Monti I, Sajic T, Heusel M, Weiss T, Malissen M, Schlapbach R, Collins BC, Ghosh S, Kitano H, Aebersold R, Malissen B, Gstaiger M. Caron E, et al. Among authors: sajic t. Cell Rep. 2017 Mar 28;18(13):3219-3226. doi: 10.1016/j.celrep.2017.03.019. Cell Rep. 2017. PMID: 28355572 Free PMC article.
Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells.
Liu Y, Borel C, Li L, Müller T, Williams EG, Germain PL, Buljan M, Sajic T, Boersema PJ, Shao W, Faini M, Testa G, Beyer A, Antonarakis SE, Aebersold R. Liu Y, et al. Among authors: sajic t. Nat Commun. 2017 Oct 31;8(1):1212. doi: 10.1038/s41467-017-01422-6. Nat Commun. 2017. PMID: 29089484 Free PMC article.
Similarities and Differences of Blood N-Glycoproteins in Five Solid Carcinomas at Localized Clinical Stage Analyzed by SWATH-MS.
Sajic T, Liu Y, Arvaniti E, Surinova S, Williams EG, Schiess R, Hüttenhain R, Sethi A, Pan S, Brentnall TA, Chen R, Blattmann P, Friedrich B, Niméus E, Malander S, Omlin A, Gillessen S, Claassen M, Aebersold R. Sajic T, et al. Cell Rep. 2018 May 29;23(9):2819-2831.e5. doi: 10.1016/j.celrep.2018.04.114. Cell Rep. 2018. PMID: 29847809 Free article.
Separation of blood microsamples by exploiting sedimentation at the microscale.
Forchelet D, Béguin S, Sajic T, Bararpour N, Pataky Z, Frias M, Grabherr S, Augsburger M, Liu Y, Charnley M, Déglon J, Aebersold R, Thomas A, Renaud P. Forchelet D, et al. Among authors: sajic t. Sci Rep. 2018 Sep 20;8(1):14101. doi: 10.1038/s41598-018-32314-4. Sci Rep. 2018. PMID: 30237536 Free PMC article.
Proteomic Profiling of Advanced Melanoma Patients to Predict Therapeutic Response to Anti-PD-1 Therapy.
Zila N, Eichhoff OM, Steiner I, Mohr T, Bileck A, Cheng PF, Leitner A, Gillet L, Sajic T, Goetze S, Friedrich B, Bortel P, Strobl J, Reitermaier R, Hogan SA, Martínez Gómez JM, Staeger R, Tuchmann F, Peters S, Stary G, Kuttke M, Elbe-Bürger A, Hoeller C, Kunstfeld R, Weninger W, Wollscheid B, Dummer R, French LE, Gerner C, Aebersold R, Levesque MP, Paulitschke V. Zila N, et al. Among authors: sajic t. Clin Cancer Res. 2024 Jan 5;30(1):159-175. doi: 10.1158/1078-0432.CCR-23-0562. Clin Cancer Res. 2024. PMID: 37861398
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