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Graph pangenome captures missing heritability and empowers tomato breeding.
Zhou Y, Zhang Z, Bao Z, Li H, Lyu Y, Zan Y, Wu Y, Cheng L, Fang Y, Wu K, Zhang J, Lyu H, Lin T, Gao Q, Saha S, Mueller L, Fei Z, Städler T, Xu S, Zhang Z, Speed D, Huang S. Zhou Y, et al. Among authors: saha s. Nature. 2022 Jun;606(7914):527-534. doi: 10.1038/s41586-022-04808-9. Epub 2022 Jun 8. Nature. 2022. PMID: 35676474 Free PMC article.
The Sol Genomics Network (SGN)--from genotype to phenotype to breeding.
Fernandez-Pozo N, Menda N, Edwards JD, Saha S, Tecle IY, Strickler SR, Bombarely A, Fisher-York T, Pujar A, Foerster H, Yan A, Mueller LA. Fernandez-Pozo N, et al. Among authors: saha s. Nucleic Acids Res. 2015 Jan;43(Database issue):D1036-41. doi: 10.1093/nar/gku1195. Epub 2014 Nov 26. Nucleic Acids Res. 2015. PMID: 25428362 Free PMC article.
Combining 'omics and microscopy to visualize interactions between the Asian citrus psyllid vector and the Huanglongbing pathogen Candidatus Liberibacter asiaticus in the insect gut.
Kruse A, Fattah-Hosseini S, Saha S, Johnson R, Warwick E, Sturgeon K, Mueller L, MacCoss MJ, Shatters RG Jr, Cilia Heck M. Kruse A, et al. Among authors: saha s. PLoS One. 2017 Jun 20;12(6):e0179531. doi: 10.1371/journal.pone.0179531. eCollection 2017. PLoS One. 2017. PMID: 28632769 Free PMC article.
A quick guide for student-driven community genome annotation.
Hosmani PS, Shippy T, Miller S, Benoit JB, Munoz-Torres M, Flores-Gonzalez M, Mueller LA, Wiersma-Koch H, D'Elia T, Brown SJ, Saha S. Hosmani PS, et al. Among authors: saha s. PLoS Comput Biol. 2019 Apr 3;15(4):e1006682. doi: 10.1371/journal.pcbi.1006682. eCollection 2019 Apr. PLoS Comput Biol. 2019. PMID: 30943207 Free PMC article.
Longitudinal Transcriptomic, Proteomic, and Metabolomic Analyses of Citrus sinensis (L.) Osbeck Graft-Inoculated with "Candidatus Liberibacter asiaticus".
Chin EL, Ramsey JS, Mishchuk DO, Saha S, Foster E, Chavez JD, Howe K, Zhong X, Polek M, Godfrey KE, Mueller LA, Bruce JE, Heck M, Slupsky CM. Chin EL, et al. Among authors: saha s. J Proteome Res. 2020 Feb 7;19(2):719-732. doi: 10.1021/acs.jproteome.9b00616. Epub 2020 Jan 15. J Proteome Res. 2020. PMID: 31885275
Breedbase: a digital ecosystem for modern plant breeding.
Morales N, Ogbonna AC, Ellerbrock BJ, Bauchet GJ, Tantikanjana T, Tecle IY, Powell AF, Lyon D, Menda N, Simoes CC, Saha S, Hosmani P, Flores M, Panitz N, Preble RS, Agbona A, Rabbi I, Kulakow P, Peteti P, Kawuki R, Esuma W, Kanaabi M, Chelangat DM, Uba E, Olojede A, Onyeka J, Shah T, Karanja M, Egesi C, Tufan H, Paterne A, Asfaw A, Jannink JL, Wolfe M, Birkett CL, Waring DJ, Hershberger JM, Gore MA, Robbins KR, Rife T, Courtney C, Poland J, Arnaud E, Laporte MA, Kulembeka H, Salum K, Mrema E, Brown A, Bayo S, Uwimana B, Akech V, Yencho C, de Boeck B, Campos H, Swennen R, Edwards JD, Mueller LA. Morales N, et al. Among authors: saha s. G3 (Bethesda). 2022 Jul 6;12(7):jkac078. doi: 10.1093/g3journal/jkac078. G3 (Bethesda). 2022. PMID: 35385099 Free PMC article.
5,585 results