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HoPaCI-DB: host-Pseudomonas and Coxiella interaction database.
Bleves S, Dunger I, Walter MC, Frangoulidis D, Kastenmüller G, Voulhoux R, Ruepp A. Bleves S, et al. Among authors: ruepp a. Nucleic Acids Res. 2014 Jan;42(Database issue):D671-6. doi: 10.1093/nar/gkt925. Epub 2013 Oct 16. Nucleic Acids Res. 2014. PMID: 24137008 Free PMC article.
MIPS: analysis and annotation of proteins from whole genomes in 2005.
Mewes HW, Frishman D, Mayer KF, Münsterkötter M, Noubibou O, Pagel P, Rattei T, Oesterheld M, Ruepp A, Stümpflen V. Mewes HW, et al. Among authors: ruepp a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D169-72. doi: 10.1093/nar/gkj148. Nucleic Acids Res. 2006. PMID: 16381839 Free PMC article.
MPact: the MIPS protein interaction resource on yeast.
Güldener U, Münsterkötter M, Oesterheld M, Pagel P, Ruepp A, Mewes HW, Stümpflen V. Güldener U, et al. Among authors: ruepp a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D436-41. doi: 10.1093/nar/gkj003. Nucleic Acids Res. 2006. PMID: 16381906 Free PMC article.
Beside the integration of high-throughput data, information about experimental evidence for PPIs in the literature was compiled by experts adding up to 4300 distinct PPIs connecting 1500 proteins in yeast. As the interaction data is a complementary part of CYGD, interactiv …
Beside the integration of high-throughput data, information about experimental evidence for PPIs in the literature was compiled by experts a …
The Mouse Functional Genome Database (MfunGD): functional annotation of proteins in the light of their cellular context.
Ruepp A, Doudieu ON, van den Oever J, Brauner B, Dunger-Kaltenbach I, Fobo G, Frishman G, Montrone C, Skornia C, Wanka S, Rattei T, Pagel P, Riley L, Frishman D, Surmeli D, Tetko IV, Oesterheld M, Stümpflen V, Mewes HW. Ruepp A, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D568-71. doi: 10.1093/nar/gkj074. Nucleic Acids Res. 2006. PMID: 16381934 Free PMC article.
CORUM: the comprehensive resource of mammalian protein complexes.
Ruepp A, Brauner B, Dunger-Kaltenbach I, Frishman G, Montrone C, Stransky M, Waegele B, Schmidt T, Doudieu ON, Stümpflen V, Mewes HW. Ruepp A, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D646-50. doi: 10.1093/nar/gkm936. Epub 2007 Oct 26. Nucleic Acids Res. 2008. PMID: 17965090 Free PMC article.
MIPS: analysis and annotation of genome information in 2007.
Mewes HW, Dietmann S, Frishman D, Gregory R, Mannhaupt G, Mayer KF, Münsterkötter M, Ruepp A, Spannagl M, Stümpflen V, Rattei T. Mewes HW, et al. Among authors: ruepp a. Nucleic Acids Res. 2008 Jan;36(Database issue):D196-201. doi: 10.1093/nar/gkm980. Epub 2007 Dec 23. Nucleic Acids Res. 2008. PMID: 18158298 Free PMC article.
CORUM: the comprehensive resource of mammalian protein complexes--2009.
Ruepp A, Waegele B, Lechner M, Brauner B, Dunger-Kaltenbach I, Fobo G, Frishman G, Montrone C, Mewes HW. Ruepp A, et al. Nucleic Acids Res. 2010 Jan;38(Database issue):D497-501. doi: 10.1093/nar/gkp914. Epub 2009 Nov 1. Nucleic Acids Res. 2010. PMID: 19884131 Free PMC article.
The Negatome database: a reference set of non-interacting protein pairs.
Smialowski P, Pagel P, Wong P, Brauner B, Dunger I, Fobo G, Frishman G, Montrone C, Rattei T, Frishman D, Ruepp A. Smialowski P, et al. Among authors: ruepp a. Nucleic Acids Res. 2010 Jan;38(Database issue):D540-4. doi: 10.1093/nar/gkp1026. Epub 2009 Nov 17. Nucleic Acids Res. 2010. PMID: 19920129 Free PMC article.
MIPS: curated databases and comprehensive secondary data resources in 2010.
Mewes HW, Ruepp A, Theis F, Rattei T, Walter M, Frishman D, Suhre K, Spannagl M, Mayer KF, Stümpflen V, Antonov A. Mewes HW, et al. Among authors: ruepp a. Nucleic Acids Res. 2011 Jan;39(Database issue):D220-4. doi: 10.1093/nar/gkq1157. Epub 2010 Nov 24. Nucleic Acids Res. 2011. PMID: 21109531 Free PMC article.
61 results