Rubin BE - Search Results

1

Infant microbiome cultivation and metagenomic analysis reveal Bifidobacterium 2'-fucosyllactose utilization can be facilitated by coexisting species.

Lou YC, Rubin BE, Schoelmerich MC, DiMarco KS, Borges AL, Rovinsky R, Song L, Doudna JA, Banfield JF. Lou YC, et al. Among authors: rubin be. Nat Commun. 2023 Nov 16;14(1):7417. doi: 10.1038/s41467-023-43279-y. Nat Commun. 2023. PMID: 37973815 Free PMC article.

2

Species- and site-specific genome editing in complex bacterial communities.

Rubin BE, Diamond S, Cress BF, Crits-Christoph A, Lou YC, Borges AL, Shivram H, He C, Xu M, Zhou Z, Smith SJ, Rovinsky R, Smock DCJ, Tang K, Owens TK, Krishnappa N, Sachdeva R, Barrangou R, Deutschbauer AM, Banfield JF, Doudna JA. Rubin BE, et al. Nat Microbiol. 2022 Jan;7(1):34-47. doi: 10.1038/s41564-021-01014-7. Epub 2021 Dec 6. Nat Microbiol. 2022. PMID: 34873292 Free PMC article.

3

Monitoring SARS-CoV-2 incidence and seroconversion among university students and employees: a longitudinal cohort study in California, June-August 2020.

Hunter LA, Wyman S, Packel LJ, Facente SN, Li Y, Harte A, Nicolette G; IGI SARS-CoV-2 Testing Consortium; Di Germanio C, Busch MP, Reingold AL, Petersen ML. Hunter LA, et al. BMJ Open. 2023 Apr 6;13(4):e063999. doi: 10.1136/bmjopen-2022-063999. BMJ Open. 2023. PMID: 37024253 Free PMC article.

4

The circadian clock and darkness control natural competence in cyanobacteria.

Taton A, Erikson C, Yang Y, Rubin BE, Rifkin SA, Golden JW, Golden SS. Taton A, et al. Among authors: rubin be. Nat Commun. 2020 Apr 3;11(1):1688. doi: 10.1038/s41467-020-15384-9. Nat Commun. 2020. PMID: 32245943 Free PMC article.

5

Mutant phenotypes for thousands of bacterial genes of unknown function.

Price MN, Wetmore KM, Waters RJ, Callaghan M, Ray J, Liu H, Kuehl JV, Melnyk RA, Lamson JS, Suh Y, Carlson HK, Esquivel Z, Sadeeshkumar H, Chakraborty R, Zane GM, Rubin BE, Wall JD, Visel A, Bristow J, Blow MJ, Arkin AP, Deutschbauer AM. Price MN, et al. Among authors: rubin be. Nature. 2018 May;557(7706):503-509. doi: 10.1038/s41586-018-0124-0. Epub 2018 May 16. Nature. 2018. PMID: 29769716

6

A Hard Day's Night: Cyanobacteria in Diel Cycles.

Welkie DG, Rubin BE, Diamond S, Hood RD, Savage DF, Golden SS. Welkie DG, et al. Among authors: rubin be. Trends Microbiol. 2019 Mar;27(3):231-242. doi: 10.1016/j.tim.2018.11.002. Epub 2018 Dec 5. Trends Microbiol. 2019. PMID: 30527541 Free PMC article. Review.

7

Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA.

Welkie DG, Rubin BE, Chang YG, Diamond S, Rifkin SA, LiWang A, Golden SS. Welkie DG, et al. Among authors: rubin be. Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):E7174-E7183. doi: 10.1073/pnas.1802940115. Epub 2018 Jul 10. Proc Natl Acad Sci U S A. 2018. PMID: 29991601 Free PMC article.

8

Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis.

Broddrick JT, Rubin BE, Welkie DG, Du N, Mih N, Diamond S, Lee JJ, Golden SS, Palsson BO. Broddrick JT, et al. Among authors: rubin be. Proc Natl Acad Sci U S A. 2016 Dec 20;113(51):E8344-E8353. doi: 10.1073/pnas.1613446113. Epub 2016 Dec 1. Proc Natl Acad Sci U S A. 2016. PMID: 27911809 Free PMC article.

9

Multimodal, broadly neutralizing antibodies against SARS-CoV-2 identified by high-throughput native pairing of BCRs from bulk B cells.

Keitany GJ, Rubin BER, Garrett ME, Musa A, Tracy J, Liang Y, Ebert P, Moore AJ, Guan J, Eggers E, Lescano N, Brown R, Carbo A, Al-Asadi H, Ching T, Day A, Harris R, Linkem C, Popov D, Wilkins C, Li L, Wang J, Liu C, Chen L, Dines JN, Atyeo C, Alter G, Baldo L, Sherwood A, Howie B, Klinger M, Yusko E, Robins HS, Benzeno S, Gilbert AE. Keitany GJ, et al. Among authors: rubin ber. Cell Chem Biol. 2023 Nov 16;30(11):1377-1389.e8. doi: 10.1016/j.chembiol.2023.07.011. Epub 2023 Aug 15. Cell Chem Biol. 2023. PMID: 37586370 Free PMC article.

10

Convergent and complementary selection shaped gains and losses of eusociality in sweat bees.

Jones BM, Rubin BER, Dudchenko O, Kingwell CJ, Traniello IM, Wang ZY, Kapheim KM, Wyman ES, Adastra PA, Liu W, Parsons LR, Jackson SR, Goodwin K, Davidson SM, McBride MJ, Webb AE, Omufwoko KS, Van Dorp N, Otárola MF, Pham M, Omer AD, Weisz D, Schraiber J, Villanea F, Wcislo WT, Paxton RJ, Hunt BG, Aiden EL, Kocher SD. Jones BM, et al. Among authors: rubin ber. Nat Ecol Evol. 2023 Apr;7(4):557-569. doi: 10.1038/s41559-023-02001-3. Epub 2023 Mar 20. Nat Ecol Evol. 2023. PMID: 36941345

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